SMTL ID : 9gwz.4 (3 other biounits)

Crystal structure of 23ME-00610 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: R.99, T.102, V.104 Chain B: Y.53, R.54 Ligand excluded by PLIP

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: V.92, Q.110, G.111, L.113, P.154 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.111 Water bridges: A:L.113, A:L.113 PO4.3: 5 residues within 4Å: Chain A: V.168, H.169 Chain B: T.168, E.169, D.171 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:V.168 Water bridges: A:V.168, A:H.169, A:T.170, B:D.171, B:S.172 Salt bridges: A:H.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Melero, C. et al., CD200R1 immune checkpoint blockade by the first-in-human anti-CD200R1 antibody 23ME-00610: molecular mechanism and engineering of a surrogate antibody. Mabs (2024)

Release Date

2024-10-23

Peptides

23ME-00610 Fab (heavy): A
23ME-00610 Fab (light): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
EEE

B
FFF

23ME-00610 Fab (heavy)

23ME-00610 Fab (light)

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