SMTL ID : 9h9p.1

Spokes 12 and 13 of the human gamma-tubulin ring complex in complex with CDK5RAP2 and docked MZT2/GCP2-NHD module

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-2-1-mer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)(Covalent)

GDP.1: 11 residues within 4Å: Chain E: Q.12, C.13, G.101, N.102, A.142, G.144, T.145, Q.184, N.207, F.225, N.229 6 PLIP interactions: 6 interactions with chain E Hydrogen bonds: E:G.101, E:T.145, E:Q.184, E:N.207, E:N.229, E:N.229 GDP.2: 12 residues within 4Å: Chain F: Q.12, C.13, G.101, S.140, A.142, G.144, T.145, G.146, L.210, F.225, I.228, N.229 9 PLIP interactions: 9 interactions with chain F Hydrogen bonds: F:Q.12, F:S.140, F:G.144, F:T.145, F:G.146, F:N.207, F:N.229 pi-Stacking: F:F.225, F:F.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, A. et al., Structural insights into the interplay between microtubule polymerases, gamma-tubulin complexes and their receptors. Nat Commun (2025)

Release Date

2025-01-15

Peptides

CDK5 regulatory subunit-associated protein 2: AB
Gamma-tubulin complex component 6: C
Isoform 3 of Gamma-tubulin complex component 2: D
Tubulin gamma-1 chain: EF
Mitotic-spindle organizing protein 2A: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
G

C
L

D
M

E
l

F
m

G
C

CDK5 regulatory subunit-associated protein 2

Gamma-tubulin complex component 6

Isoform 3 of Gamma-tubulin complex component 2

Tubulin gamma-1 chain

Mitotic-spindle organizing protein 2A

Related Entries With Identical Sequence