SMTL ID : 9hgd.1 (1 other biounit)

Crystal structure of human GABARAP in complex with cyclic peptide GAB_D23

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: Y.7, E.10, H.11, K.49 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: Y.27, P.28, D.29, R.30 Ligand excluded by PLIP

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 3 residues within 4Å: Chain A: N.84, V.85, I.86 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.86 Water bridges: A:I.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rettie, S.A. et al., Accurate de novo design of high-affinity protein-binding macrocycles using deep learning. Nat.Chem.Biol. (2025)

Release Date

2025-07-09

Peptides

Gamma-aminobutyric acid receptor-associated protein: A
GAB_D23: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Gamma-aminobutyric acid receptor-associated protein

GAB_D23

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