SMTL ID : 9i69.1

Crystal structure of human Cdc20 bound to synthetic D-box peptide D20

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.46 Å

Oligo State

monomer

Ligands

1 x ARG- ALA- PRO- 0JY- SER- ASP: ARG-ALA-PRO-0JY-SER-ASP(Non-covalent)

ARG-ALA-PRO-0JY-SER-ASP.1: 11 residues within 4Å: Chain A: R.174, I.175, L.176, D.177, P.179, V.200, L.202, Y.207, W.209, I.216, E.465 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.176, A:Y.207, A:W.209 Hydrogen bonds: A:D.177, A:D.177 Water bridges: A:R.174, A:R.174, A:I.175 Salt bridges: A:R.174, A:D.177, A:E.465

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eapen, R. et al., Development of D-box peptides to inhibit the Anaphase Promoting Complex/Cyclosome. To be published

Release Date

2025-02-12

Peptides

Cell division cycle protein 20 homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division cycle protein 20 homolog

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