SMTL ID : 9ikp.1

Crystal structure of human malectin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

homo-dimer

Ligands

2 x DIO: 1,4-DIETHYLENE DIOXIDE(Non-covalent)

DIO.1: 4 residues within 4Å: Chain A: W.9, A.10, R.27 Chain B: Y.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.10 DIO.3: 3 residues within 4Å: Chain B: W.9, A.10, R.27 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: E.32, G.33, R.37, A.38, R.62 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.33, A:A.38 Water bridges: A:D.29, A:R.62, A:R.62 Salt bridges: A:R.62 SO4.4: 5 residues within 4Å: Chain B: E.32, G.33, R.37, A.38, R.62 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.33, B:A.38 Water bridges: B:D.29, B:G.33, B:R.62 Salt bridges: B:R.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Si, Y.L., The Structural Basis of Human Malectin Recognition of Ligands. To Be Published

Release Date

2025-07-02

Peptides

Malectin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Malectin

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