SMTL ID : 9jd4.1

taurine transporter

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.26 Å

Oligo State

monomer

Ligands

1 x ABU: GAMMA-AMINO-BUTANOIC ACID(Non-covalent)

ABU.1: 12 residues within 4Å: Chain A: F.58, G.60, L.61, G.62, L.134, Y.138, F.300, S.301, A.303, L.306, E.406 Ligands: NA.11 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.138, A:F.300 Hydrogen bonds: A:G.60, A:G.62, A:Y.138

3 x OCT: N-OCTANE(Non-covalent)

OCT.2: 3 residues within 4Å: Chain A: F.254, L.258, V.339 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.254, A:L.258, A:V.339 OCT.4: 2 residues within 4Å: Chain A: V.128, S.132 No protein-ligand interaction detected (PLIP) OCT.8: 1 residues within 4Å: Chain A: Q.567 No protein-ligand interaction detected (PLIP)

3 x D12: DODECANE(Non-covalent)

D12.3: 5 residues within 4Å: Chain A: Y.125, S.552, C.556, V.560, I.563 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.560, A:I.563 D12.5: 2 residues within 4Å: Chain A: F.477, W.481 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.477, A:W.481, A:W.481 D12.7: 3 residues within 4Å: Chain A: G.214, L.441, T.448 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.448

1 x HEX: HEXANE(Non-covalent)

HEX.6: 1 residues within 4Å: Chain A: L.261 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.261

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.9: 4 residues within 4Å: Chain A: Y.83, Q.297, S.301, S.337 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.10: 4 residues within 4Å: Chain A: G.56, V.59, L.398, D.401 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.401 NA.11: 5 residues within 4Å: Chain A: F.58, N.63, S.301, N.333 Ligands: ABU.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.63, A:S.301, A:N.333

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.12: 2 residues within 4Å: Chain A: T.189, N.190 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Dimerization and substrate recognition of human taurine transporter. Nat Commun (2025)

Release Date

2025-07-16

Peptides

Sodium- and chloride-dependent taurine transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sodium- and chloride-dependent taurine transporter

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