SMTL ID : 9jro.1

Structural Insights into Selective Antagonism of PF04418948 and EP2 Prostaglandin Receptor

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x 01: 1-(4-fluorophenyl)carbonyl-3-[(6-methoxynaphthalen-2-yl)oxymethyl]azetidine-3-carboxylic acid

01.1: 12 residues within 4Å: Chain D: I.273, S.274, M.277, I.331, V.335, Y.339, T.431, W.432, R.628, S.631, I.632, S.634 9 PLIP interactions: 9 interactions with chain D Hydrophobic interactions: D:I.273, D:I.331, D:I.331, D:W.432, D:R.628, D:R.628, D:I.632 Hydrogen bonds: D:Y.339, D:S.634

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y.L. et al., Structural Insights into Selective and Dual Antagonism of EP2 and EP4 Prostaglandin Receptor. To Be Published

Release Date

2025-10-22

Peptides

Heavy chain of Fab fragment: A
Light chain of Fab fragment: B
Nb: C
GFP-like fluorescent chromoprotein,Prostaglandin E2 receptor EP2 subtype,Soluble cytochrome b562,Prostaglandin E2 receptor EP2 subtype,Soluble cytochrome b562: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
N

D
A

Membrane

We predict this structure to be a membrane protein.
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Heavy chain of Fab fragment

Light chain of Fab fragment

Nb

GFP-like fluorescent chromoprotein,Prostaglandin E2 receptor EP2 subtype,Soluble cytochrome b562,Prostaglandin E2 receptor EP2 subtype,Soluble cytochrome b562

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