SMTL ID : 9kyg.2 (1 other biounit)

Crystal structure of E.coli ac4C amidohydrolase YqfB in complex with cytidine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x CTN: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE(Non-covalent)

CTN.1: 10 residues within 4Å: Chain A: T.7, F.8, F.9, F.12, T.24, I.25, R.26, F.44, I.88, Y.89 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.88, A:Y.89 Hydrogen bonds: A:T.7, A:F.9, A:T.24, A:I.25, A:I.25, A:R.26 Water bridges: A:K.21 pi-Cation interactions: A:R.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, W.T. et al., Crystal structure of E.coli ac4C amidohydrolase YqfB in complex with cytidine. To Be Published

Release Date

2025-08-20

Peptides

N(4)-acetylcytidine amidohydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

N(4)-acetylcytidine amidohydrolase

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