SMTL ID : 9lg0.1

Crystal Structure of Human Peroxiredoxin I in Complex with SAB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

homo-dimer

Ligands

1 x 01: (2~{R})-3-[3,4-bis(oxidanyl)phenyl]-2-[(~{E})-3-[(2~{S},3~{S})-2-[3,4-bis(oxidanyl)phenyl]-3-[(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]oxycarbonyl-7-oxidanyl-2,3-dihydro-1-benzofuran-4-yl]prop-2-enoyl]oxy-propanoic acid

01.1: 15 residues within 4Å: Chain A: P.45, L.46, T.49, F.50, V.51, S.52, E.123, I.125, R.128, L.147, P.148 Chain B: F.165, T.166, H.169, G.170 17 PLIP interactions: 4 interactions with chain B, 13 interactions with chain A Hydrophobic interactions: B:F.165, B:T.166, A:P.45, A:P.45, A:F.50, A:I.125, A:L.147 Hydrogen bonds: B:H.169, B:G.170, A:L.46, A:T.49, A:F.50, A:V.51, A:S.52, A:E.123 Water bridges: A:E.123 Salt bridges: A:R.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dang, W. et al., Augmentation of PRDX1-DOK3 interaction alleviates rheumatoid arthritis progression by suppressing plasma cell differentiation. Acta Pharm Sin B (2025)

Release Date

2025-10-01

Peptides

Peroxiredoxin-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxiredoxin-1

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