SMTL ID : 9lj3.2 (5 other biounits)

Crystal structure of P25

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

monomer

Ligands

1 x 01: 3-[[4-chloranyl-2-[(2-hydroxyethylamino)methyl]-5-[[2-methyl-3-[3-[2-[2-[(3~{R})-3-oxidanylpyrrolidin-1-yl]ethoxy]ethoxy]phenyl]phenyl]methoxy]phenoxy]methyl]benzenecarbonitrile

01.1: 11 residues within 4Å: Chain A: F.2, Y.39, Q.49, M.98, I.99, S.100, A.104, D.105, Y.106, K.107, R.108 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.39, A:M.98, A:A.104, A:Y.106, A:Y.106 Hydrogen bonds: A:K.107, A:K.107, A:R.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, Z. et al., Discovery and Crystallography Study of Novel Resorcinol Dibenzyl Ether-Based PD-1/PD-L1 Inhibitors with Improved Drug-like and Pharmacokinetic Properties for Cancer Treatment. J.Med.Chem. (2025)

Release Date

2025-06-25

Peptides

Programmed cell death 1 ligand 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Programmed cell death 1 ligand 1

Related Entries With Identical Sequence