SMTL ID : 9q9p.1

TRIM21 PRYSPRY bound to compound 37

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 01: (2~{S},4~{S})-1-[(3~{S})-3-azanyl-3-(2-methoxyphenyl)propanoyl]-4-cyclohexyl-~{N}-[(2~{S})-1-(methylamino)-1-oxidanylidene-3-pyridin-4-yl-propan-2-yl]pyrrolidine-2-carboxamide

01.1: 14 residues within 4Å: Chain A: Y.51, P.52, M.53, D.78, H.91, F.92, L.93, L.94, W.104, W.106, Q.118, S.170, G.172, F.173 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.51, A:P.52, A:H.91, A:L.93, A:F.173 Hydrogen bonds: A:Y.51, A:L.94, A:Q.118 pi-Stacking: A:W.104, A:W.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luptak, J. et al., Development of TRIM21 PROTAC molecules. To Be Published

Release Date

2025-10-08

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase TRIM21

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