- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x U- A- C- A- A: A-site tRNA molecule(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
- 231 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
MG.4: 3 residues within 4Å:- Chain 3: G.1851
- Chain F: H.53, T.219
5 PLIP interactions:1 interactions with chain F, 4 Ligand-Water interactions- Metal complexes: F:H.53, H2O.1, H2O.1, H2O.1, H2O.11
MG.5: 2 residues within 4Å:- Chain 3: C.1702
- Chain G: H.148
5 PLIP interactions:1 interactions with chain G, 4 Ligand-Water interactions- Metal complexes: G:H.148, H2O.1, H2O.1, H2O.11, H2O.19
MG.8: 2 residues within 4Å:- Chain 3: A.1303, U.2642
No protein-ligand interaction detected (PLIP)MG.9: 1 residues within 4Å:- Chain 3: A.2076
No protein-ligand interaction detected (PLIP)MG.10: 5 residues within 4Å:- Chain 3: U.549, A.550, G.557, U.1272, G.1273
No protein-ligand interaction detected (PLIP)MG.11: 1 residues within 4Å:- Chain 3: A.621
No protein-ligand interaction detected (PLIP)MG.12: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.13: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.14: 1 residues within 4Å:- Chain 3: G.604
No protein-ligand interaction detected (PLIP)MG.15: 3 residues within 4Å:- Chain 3: A.1018, A.1019, G.1020
No protein-ligand interaction detected (PLIP)MG.16: 2 residues within 4Å:- Chain 3: G.1201, C.1202
No protein-ligand interaction detected (PLIP)MG.17: 1 residues within 4Å:- Chain 3: A.1200
No protein-ligand interaction detected (PLIP)MG.18: 4 residues within 4Å:- Chain 3: G.846
- Chain H: R.54, S.55, G.59
No protein-ligand interaction detected (PLIP)MG.19: 2 residues within 4Å:- Chain 3: G.846, A.847
No protein-ligand interaction detected (PLIP)MG.20: 1 residues within 4Å:- Chain 3: A.845
No protein-ligand interaction detected (PLIP)MG.21: 2 residues within 4Å:- Chain 3: A.118, U.119
No protein-ligand interaction detected (PLIP)MG.22: 1 residues within 4Å:- Chain 3: A.1291
No protein-ligand interaction detected (PLIP)MG.23: 1 residues within 4Å:- Chain 3: G.1803
No protein-ligand interaction detected (PLIP)MG.24: 1 residues within 4Å:- Chain 3: A.2089
No protein-ligand interaction detected (PLIP)MG.25: 1 residues within 4Å:- Chain 3: G.876
No protein-ligand interaction detected (PLIP)MG.26: 3 residues within 4Å:- Chain 3: C.2093, C.2275, U.2276
No protein-ligand interaction detected (PLIP)MG.27: 2 residues within 4Å:- Chain 3: G.1855, G.1999
No protein-ligand interaction detected (PLIP)MG.28: 4 residues within 4Å:- Chain 3: A.1726, U.1784, U.1788, A.1789
No protein-ligand interaction detected (PLIP)MG.29: 4 residues within 4Å:- Chain 3: C.46, G.181, C.182, C.184
No protein-ligand interaction detected (PLIP)MG.30: 2 residues within 4Å:- Chain 3: U.2709, A.2748
No protein-ligand interaction detected (PLIP)MG.31: 3 residues within 4Å:- Chain 3: A.795, A.796, A.1658
No protein-ligand interaction detected (PLIP)MG.32: 3 residues within 4Å:- Chain 3: U.2053, G.2054, A.2060
No protein-ligand interaction detected (PLIP)MG.33: 2 residues within 4Å:- Chain 3: C.832, U.835
No protein-ligand interaction detected (PLIP)MG.34: 3 residues within 4Å:- Chain 3: A.1807, C.1809, A.1810
No protein-ligand interaction detected (PLIP)MG.35: 2 residues within 4Å:- Chain 3: G.496, A.499
No protein-ligand interaction detected (PLIP)MG.36: 1 residues within 4Å:- Chain 3: G.2615
No protein-ligand interaction detected (PLIP)MG.37: 2 residues within 4Å:- Chain 3: U.829, G.2615
No protein-ligand interaction detected (PLIP)MG.38: 3 residues within 4Å:- Chain 3: C.2600, G.2601, C.2602
No protein-ligand interaction detected (PLIP)MG.39: 1 residues within 4Å:- Chain 3: G.2522
No protein-ligand interaction detected (PLIP)MG.40: 1 residues within 4Å:- Chain 3: A.2480
No protein-ligand interaction detected (PLIP)MG.41: 4 residues within 4Å:- Chain 3: A.1713, C.1714, U.1715, G.2577
No protein-ligand interaction detected (PLIP)MG.42: 2 residues within 4Å:- Chain 3: C.1714, U.1715
No protein-ligand interaction detected (PLIP)MG.43: 2 residues within 4Å:- Chain 3: C.2021, U.2022
No protein-ligand interaction detected (PLIP)MG.44: 3 residues within 4Å:- Chain 3: A.198, A.200, C.201
No protein-ligand interaction detected (PLIP)MG.45: 1 residues within 4Å:- Chain 3: G.2866
No protein-ligand interaction detected (PLIP)MG.46: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.47: 2 residues within 4Å:- Chain 3: C.2731, A.2732
No protein-ligand interaction detected (PLIP)MG.48: 2 residues within 4Å:- Chain 3: G.907, A.955
No protein-ligand interaction detected (PLIP)MG.49: 1 residues within 4Å:- Chain 3: A.952
No protein-ligand interaction detected (PLIP)MG.50: 1 residues within 4Å:- Chain 3: G.1180
No protein-ligand interaction detected (PLIP)MG.51: 2 residues within 4Å:- Chain 3: G.1005, G.2056
No protein-ligand interaction detected (PLIP)MG.52: 1 residues within 4Å:- Chain 3: A.1024
No protein-ligand interaction detected (PLIP)MG.53: 1 residues within 4Å:- Chain 3: U.1305
No protein-ligand interaction detected (PLIP)MG.54: 1 residues within 4Å:- Chain 3: U.2038
No protein-ligand interaction detected (PLIP)MG.55: 2 residues within 4Å:- Chain 3: A.615, A.1027
No protein-ligand interaction detected (PLIP)MG.56: 1 residues within 4Å:- Chain 3: A.1025
No protein-ligand interaction detected (PLIP)MG.57: 2 residues within 4Å:- Chain 3: A.1708, G.1711
No protein-ligand interaction detected (PLIP)MG.58: 2 residues within 4Å:- Chain 3: A.1708, A.1709
No protein-ligand interaction detected (PLIP)MG.59: 1 residues within 4Å:- Chain 3: G.1340
No protein-ligand interaction detected (PLIP)MG.60: 1 residues within 4Å:- Chain 3: G.1657
No protein-ligand interaction detected (PLIP)MG.61: 4 residues within 4Å:- Chain 3: U.871, U.872, G.2456, A.2457
No protein-ligand interaction detected (PLIP)MG.62: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.63: 2 residues within 4Å:- Chain 3: A.715, C.716
No protein-ligand interaction detected (PLIP)MG.64: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.65: 2 residues within 4Å:- Chain 3: U.709, C.710
No protein-ligand interaction detected (PLIP)MG.66: 4 residues within 4Å:- Chain 3: U.1305, A.1306, A.2032, C.2033
No protein-ligand interaction detected (PLIP)MG.67: 2 residues within 4Å:- Chain 3: A.2666, G.2667
No protein-ligand interaction detected (PLIP)MG.68: 2 residues within 4Å:- Chain 3: C.1334, U.1683
No protein-ligand interaction detected (PLIP)MG.69: 2 residues within 4Å:- Chain 3: C.1335, U.1683
No protein-ligand interaction detected (PLIP)MG.70: 1 residues within 4Å:- Chain 3: U.1680
No protein-ligand interaction detected (PLIP)MG.71: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.72: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.73: 2 residues within 4Å:- Chain 3: G.2473, G.2529
No protein-ligand interaction detected (PLIP)MG.74: 2 residues within 4Å:- Chain 3: C.1179, G.1181
No protein-ligand interaction detected (PLIP)MG.75: 3 residues within 4Å:- Chain 3: U.2101, G.2266
- Chain F: P.227
No protein-ligand interaction detected (PLIP)MG.76: 4 residues within 4Å:- Chain 3: U.2101, U.2102, G.2265, U.2270
No protein-ligand interaction detected (PLIP)MG.77: 2 residues within 4Å:- Chain 3: G.2083, G.2084
No protein-ligand interaction detected (PLIP)MG.78: 5 residues within 4Å:- Chain 3: G.2079, G.2080, C.2602, G.2603, A.2604
No protein-ligand interaction detected (PLIP)MG.79: 1 residues within 4Å:- Chain 3: G.2059
No protein-ligand interaction detected (PLIP)MG.80: 2 residues within 4Å:- Chain 3: U.829, U.830
No protein-ligand interaction detected (PLIP)MG.81: 2 residues within 4Å:- Chain 3: U.1007, C.2525
No protein-ligand interaction detected (PLIP)MG.82: 3 residues within 4Å:- Chain 3: A.992, G.1006, U.1007
No protein-ligand interaction detected (PLIP)MG.83: 2 residues within 4Å:- Chain 3: G.2622, G.2624
No protein-ligand interaction detected (PLIP)MG.84: 3 residues within 4Å:- Chain 3: G.2619, U.2620, A.2627
No protein-ligand interaction detected (PLIP)MG.85: 4 residues within 4Å:- Chain 3: A.828, U.829, G.2615, A.2616
No protein-ligand interaction detected (PLIP)MG.86: 3 residues within 4Å:- Chain 3: A.1430, U.1431, C.1648
No protein-ligand interaction detected (PLIP)MG.87: 3 residues within 4Å:- Chain 3: G.613, A.2475, C.2526
No protein-ligand interaction detected (PLIP)MG.88: 5 residues within 4Å:- Chain 3: G.2474, A.2475, A.2524, C.2525, C.2526
No protein-ligand interaction detected (PLIP)MG.89: 3 residues within 4Å:- Chain 3: U.987
- Chain L: H.35, K.36
No protein-ligand interaction detected (PLIP)MG.90: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.91: 3 residues within 4Å:- Chain 3: C.1351, C.1352, G.1369
No protein-ligand interaction detected (PLIP)MG.92: 2 residues within 4Å:- Chain 3: U.619, A.2530
No protein-ligand interaction detected (PLIP)MG.93: 2 residues within 4Å:- Chain 3: A.2738, G.2741
No protein-ligand interaction detected (PLIP)MG.94: 2 residues within 4Å:- Chain 3: U.609, U.610
No protein-ligand interaction detected (PLIP)MG.95: 1 residues within 4Å:- Chain 3: U.856
No protein-ligand interaction detected (PLIP)MG.96: 2 residues within 4Å:- Chain 3: A.1228, G.1229
No protein-ligand interaction detected (PLIP)MG.97: 1 residues within 4Å:- Chain 3: A.1231
No protein-ligand interaction detected (PLIP)MG.98: 3 residues within 4Å:- Chain 3: C.861, C.862, G.1226
No protein-ligand interaction detected (PLIP)MG.99: 2 residues within 4Å:- Chain 3: G.863, G.1226
No protein-ligand interaction detected (PLIP)MG.100: 4 residues within 4Å:- Chain 3: G.1033, A.1034, C.1035, G.1225
No protein-ligand interaction detected (PLIP)MG.101: 2 residues within 4Å:- Chain 3: U.1011, G.1012
No protein-ligand interaction detected (PLIP)MG.102: 4 residues within 4Å:- Chain 3: U.1067, G.1068, G.1069, A.1070
No protein-ligand interaction detected (PLIP)MG.103: 4 residues within 4Å:- Chain 3: G.457, A.458, C.2433, A.2434
No protein-ligand interaction detected (PLIP)MG.104: 2 residues within 4Å:- Chain 3: C.2433, U.2435
No protein-ligand interaction detected (PLIP)MG.105: 1 residues within 4Å:- Chain 3: C.2494
No protein-ligand interaction detected (PLIP)MG.106: 3 residues within 4Å:- Chain 3: G.2624, A.2625
- Chain F: I.241
No protein-ligand interaction detected (PLIP)MG.107: 1 residues within 4Å:- Chain 3: G.1855
No protein-ligand interaction detected (PLIP)MG.108: 2 residues within 4Å:- Chain 3: G.1799, C.1801
No protein-ligand interaction detected (PLIP)MG.109: 4 residues within 4Å:- Chain 3: C.195, A.202, G.2269, U.2270
No protein-ligand interaction detected (PLIP)MG.110: 2 residues within 4Å:- Chain 3: G.1307, A.2032
No protein-ligand interaction detected (PLIP)MG.111: 3 residues within 4Å:- Chain 3: A.2087, G.2088, G.2529
No protein-ligand interaction detected (PLIP)MG.112: 4 residues within 4Å:- Chain 3: C.554, C.555, U.556, G.557
No protein-ligand interaction detected (PLIP)MG.113: 3 residues within 4Å:- Chain 3: C.785, A.1810, A.1811
No protein-ligand interaction detected (PLIP)MG.114: 1 residues within 4Å:- Chain 3: C.1364
No protein-ligand interaction detected (PLIP)MG.115: 2 residues within 4Å:- Chain 3: A.14, G.15
No protein-ligand interaction detected (PLIP)MG.116: 5 residues within 4Å:- Chain 3: C.421, U.438, U.439, G.454, A.455
No protein-ligand interaction detected (PLIP)MG.117: 2 residues within 4Å:- Chain 3: G.416, A.468
No protein-ligand interaction detected (PLIP)MG.118: 2 residues within 4Å:- Chain 3: A.571, C.572
No protein-ligand interaction detected (PLIP)MG.119: 2 residues within 4Å:- Chain 3: C.627, A.1289
No protein-ligand interaction detected (PLIP)MG.120: 3 residues within 4Å:- Chain 3: A.629, U.1287, G.1288
No protein-ligand interaction detected (PLIP)MG.121: 2 residues within 4Å:- Chain 3: G.783, A.784
No protein-ligand interaction detected (PLIP)MG.122: 4 residues within 4Å:- Chain 3: G.774, A.775, C.776, A.806
No protein-ligand interaction detected (PLIP)MG.123: 2 residues within 4Å:- Chain 3: U.1043, C.1197
No protein-ligand interaction detected (PLIP)MG.124: 5 residues within 4Å:- Chain 3: C.1050, A.1052, A.1053, A.1054
- Chain J: K.40
No protein-ligand interaction detected (PLIP)MG.125: 4 residues within 4Å:- Chain 3: G.1309, A.1310, G.1691, C.1692
No protein-ligand interaction detected (PLIP)MG.126: 1 residues within 4Å:- Chain 3: G.1691
No protein-ligand interaction detected (PLIP)MG.127: 3 residues within 4Å:- Chain 3: A.1379, U.1646
- Chain T: I.55
No protein-ligand interaction detected (PLIP)MG.128: 4 residues within 4Å:- Chain 3: U.1431, A.1432, A.1647, C.1648
No protein-ligand interaction detected (PLIP)MG.129: 1 residues within 4Å:- Chain 3: C.2017
No protein-ligand interaction detected (PLIP)MG.130: 2 residues within 4Å:- Chain 3: G.2013, C.2578
No protein-ligand interaction detected (PLIP)MG.131: 2 residues within 4Å:- Chain 3: C.1719, A.1720
No protein-ligand interaction detected (PLIP)MG.132: 2 residues within 4Å:- Chain 3: A.1927, A.1997
No protein-ligand interaction detected (PLIP)MG.133: 2 residues within 4Å:- Chain 3: A.1997, A.1998
No protein-ligand interaction detected (PLIP)MG.134: 2 residues within 4Å:- Chain 3: G.1995, G.2619
No protein-ligand interaction detected (PLIP)MG.135: 1 residues within 4Å:- Chain 3: G.2297
No protein-ligand interaction detected (PLIP)MG.136: 3 residues within 4Å:- Chain 3: A.2295, A.2296, G.2298
No protein-ligand interaction detected (PLIP)MG.137: 1 residues within 4Å:- Chain 3: A.342
No protein-ligand interaction detected (PLIP)MG.138: 3 residues within 4Å:- Chain 3: C.1370, U.1371, C.1372
No protein-ligand interaction detected (PLIP)MG.139: 2 residues within 4Å:- Chain 3: G.778, A.806
No protein-ligand interaction detected (PLIP)MG.140: 5 residues within 4Å:- Chain 3: G.1718, A.1721, A.1722, G.1791, A.2016
No protein-ligand interaction detected (PLIP)MG.141: 2 residues within 4Å:- Chain 3: C.1865, G.1866
No protein-ligand interaction detected (PLIP)MG.142: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.143: 4 residues within 4Å:- Chain 3: U.871, C.2454, G.2455, G.2456
No protein-ligand interaction detected (PLIP)MG.144: 2 residues within 4Å:- Chain 3: A.2545, C.2567
No protein-ligand interaction detected (PLIP)MG.145: 2 residues within 4Å:- Chain 3: G.1395, G.1408
No protein-ligand interaction detected (PLIP)MG.146: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.147: 1 residues within 4Å:- Chain 3: G.1006
No protein-ligand interaction detected (PLIP)MG.148: 1 residues within 4Å:- Chain 3: C.572
No protein-ligand interaction detected (PLIP)MG.149: 4 residues within 4Å:- Chain 3: G.2088, G.2474, C.2528, U.2531
No protein-ligand interaction detected (PLIP)MG.150: 2 residues within 4Å:- Chain 3: U.2010, G.2634
No protein-ligand interaction detected (PLIP)MG.151: 2 residues within 4Å:- Chain 3: U.2276, G.2278
No protein-ligand interaction detected (PLIP)MG.152: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.153: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.154: 2 residues within 4Å:- Chain 3: C.2308, G.2309
No protein-ligand interaction detected (PLIP)MG.155: 5 residues within 4Å:- Chain 3: G.2309, U.2417, G.2418, U.2450, A.2452
No protein-ligand interaction detected (PLIP)MG.156: 1 residues within 4Å:- Chain 3: C.2479
No protein-ligand interaction detected (PLIP)MG.157: 3 residues within 4Å:- Chain 3: G.1663, G.1664, U.1665
No protein-ligand interaction detected (PLIP)MG.158: 3 residues within 4Å:- Chain 3: C.782, U.1665, A.1666
No protein-ligand interaction detected (PLIP)MG.159: 1 residues within 4Å:- Chain 3: A.2411
No protein-ligand interaction detected (PLIP)MG.160: 1 residues within 4Å:- Chain 3: A.2411
No protein-ligand interaction detected (PLIP)MG.161: 3 residues within 4Å:- Chain 3: A.1291, A.1292, G.1294
No protein-ligand interaction detected (PLIP)MG.162: 3 residues within 4Å:- Chain 3: G.496, U.497, G.498
No protein-ligand interaction detected (PLIP)MG.163: 2 residues within 4Å:- Chain 3: C.777, G.805
No protein-ligand interaction detected (PLIP)MG.164: 1 residues within 4Å:- Chain 3: U.119
No protein-ligand interaction detected (PLIP)MG.165: 4 residues within 4Å:- Chain 3: G.2316, G.2317, A.2411, C.2412
No protein-ligand interaction detected (PLIP)MG.166: 2 residues within 4Å:- Chain 3: C.1235, G.1236
No protein-ligand interaction detected (PLIP)MG.167: 3 residues within 4Å:- Chain 3: A.1233, G.1234
- Chain L: E.15
1 PLIP interactions:1 interactions with chain L- Metal complexes: L:E.15
MG.168: 4 residues within 4Å:- Chain 3: C.1968, C.1992, A.1993, A.2629
No protein-ligand interaction detected (PLIP)MG.169: 1 residues within 4Å:- Chain 3: G.492
No protein-ligand interaction detected (PLIP)MG.170: 3 residues within 4Å:- Chain 3: U.1301, G.1302, A.1303
No protein-ligand interaction detected (PLIP)MG.171: 5 residues within 4Å:- Chain 3: C.1696, G.1697
- Chain N: R.4, K.5, L.6
No protein-ligand interaction detected (PLIP)MG.172: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.173: 1 residues within 4Å:- Chain 3: A.1019
No protein-ligand interaction detected (PLIP)MG.174: 4 residues within 4Å:- Chain 3: G.1697, G.2029, A.2030
- Ligands: MG.175
No protein-ligand interaction detected (PLIP)MG.175: 4 residues within 4Å:- Chain 3: A.2030, G.2031, A.2032
- Ligands: MG.174
No protein-ligand interaction detected (PLIP)MG.176: 1 residues within 4Å:- Chain 3: A.1926
No protein-ligand interaction detected (PLIP)MG.177: 1 residues within 4Å:- Chain 3: C.1655
No protein-ligand interaction detected (PLIP)MG.193: 4 residues within 4Å:- Chain e: G.306, G.564, G.565, A.567
No protein-ligand interaction detected (PLIP)MG.194: 2 residues within 4Å:- Chain 8: R.123
- Chain e: G.544
No protein-ligand interaction detected (PLIP)MG.195: 1 residues within 4Å:- Chain e: G.668
No protein-ligand interaction detected (PLIP)MG.196: 4 residues within 4Å:- Ligands: MG.197
- Chain e: C.563, G.564, G.565
No protein-ligand interaction detected (PLIP)MG.197: 4 residues within 4Å:- Ligands: MG.196
- Chain e: G.564, G.565, A.566
No protein-ligand interaction detected (PLIP)MG.198: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.199: 4 residues within 4Å:- Chain e: U.831, G.832, C.833, G.882
No protein-ligand interaction detected (PLIP)MG.200: 4 residues within 4Å:- Chain e: A.669, A.670, U.750, C.751
No protein-ligand interaction detected (PLIP)MG.201: 2 residues within 4Å:- Chain e: A.107, G.338
No protein-ligand interaction detected (PLIP)MG.202: 1 residues within 4Å:- Chain e: A.775
No protein-ligand interaction detected (PLIP)MG.203: 2 residues within 4Å:- Chain e: C.337, C.359
No protein-ligand interaction detected (PLIP)MG.204: 4 residues within 4Å:- Chain e: C.625, A.628, A.629, C.630
No protein-ligand interaction detected (PLIP)MG.205: 4 residues within 4Å:- Chain e: C.359, C.362, A.363, G.364
No protein-ligand interaction detected (PLIP)MG.206: 2 residues within 4Å:- Chain e: G.512, A.542
No protein-ligand interaction detected (PLIP)MG.207: 3 residues within 4Å:- Chain e: C.43, G.44, U.45
No protein-ligand interaction detected (PLIP)MG.208: 4 residues within 4Å:- Chain e: G.810, U.811, C.812, C.813
No protein-ligand interaction detected (PLIP)MG.209: 2 residues within 4Å:- Chain e: A.53, A.360
No protein-ligand interaction detected (PLIP)MG.210: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.211: 1 residues within 4Å:- Chain e: C.543
No protein-ligand interaction detected (PLIP)MG.212: 2 residues within 4Å:- Chain e: U.764, G.765
No protein-ligand interaction detected (PLIP)MG.213: 2 residues within 4Å:- Chain e: A.554, G.555
No protein-ligand interaction detected (PLIP)MG.214: 1 residues within 4Å:- Chain e: G.369
No protein-ligand interaction detected (PLIP)MG.215: 2 residues within 4Å:- Chain e: G.582, C.583
No protein-ligand interaction detected (PLIP)MG.216: 5 residues within 4Å:- Chain e: C.47, C.48, U.49, U.112, G.113
No protein-ligand interaction detected (PLIP)MG.217: 1 residues within 4Å:- Chain e: G.582
No protein-ligand interaction detected (PLIP)MG.218: 1 residues within 4Å:- Chain e: C.405
No protein-ligand interaction detected (PLIP)MG.219: 2 residues within 4Å:- Chain e: A.173, C.174
No protein-ligand interaction detected (PLIP)MG.220: 1 residues within 4Å:- Chain e: A.579
No protein-ligand interaction detected (PLIP)MG.221: 4 residues within 4Å:- Chain e: C.58, A.59, C.393, U.394
No protein-ligand interaction detected (PLIP)MG.222: 2 residues within 4Å:- Chain e: G.866, A.877
No protein-ligand interaction detected (PLIP)MG.223: 1 residues within 4Å:- Chain e: G.331
No protein-ligand interaction detected (PLIP)MG.224: 3 residues within 4Å:- Chain e: U.515, A.516, A.517
No protein-ligand interaction detected (PLIP)MG.225: 3 residues within 4Å:- Chain e: A.456, G.457, A.459
No protein-ligand interaction detected (PLIP)MG.226: 3 residues within 4Å:- Chain e: U.523, G.524, A.540
No protein-ligand interaction detected (PLIP)MG.227: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)MG.228: 3 residues within 4Å:- Chain e: C.583, A.766, U.767
No protein-ligand interaction detected (PLIP)MG.229: 4 residues within 4Å:- Chain e: G.584, A.821, A.822, A.823
No protein-ligand interaction detected (PLIP)MG.230: 1 residues within 4Å:- Chain e: G.100
No protein-ligand interaction detected (PLIP)MG.231: 1 residues within 4Å:- Chain e: G.21
No protein-ligand interaction detected (PLIP)MG.232: 2 residues within 4Å:- Chain e: C.134, U.229
No protein-ligand interaction detected (PLIP)MG.233: 2 residues within 4Å:- Chain e: U.862, U.879
No protein-ligand interaction detected (PLIP)MG.234: 3 residues within 4Å:- Chain e: A.114, G.115, G.296
No protein-ligand interaction detected (PLIP)MG.235: 2 residues within 4Å:- Chain e: G.1536, C.1537
No protein-ligand interaction detected (PLIP)MG.236: 3 residues within 4Å:- Chain e: C.583, G.584, C.585
No protein-ligand interaction detected (PLIP)MG.237: 5 residues within 4Å:- Chain e: U.1508, A.1509, A.1510, G.1514, G.1515
No protein-ligand interaction detected (PLIP)MG.238: 4 residues within 4Å:- Chain e: A.1510, G.1515, A.1517, G.1518
No protein-ligand interaction detected (PLIP)MG.239: 3 residues within 4Å:- Chain e: A.789, A.801, G.1531
No protein-ligand interaction detected (PLIP)MG.240: 3 residues within 4Å:- Chain e: A.579, A.580, A.581
No protein-ligand interaction detected (PLIP)MG.241: 2 residues within 4Å:- Chain e: G.959, U.1233
No protein-ligand interaction detected (PLIP)MG.242: 6 residues within 4Å:- Chain e: C.987, C.988, U.989, U.990, G.1231, C.1232
No protein-ligand interaction detected (PLIP)MG.243: 2 residues within 4Å:- Chain e: C.988
- Chain m: E.20
No protein-ligand interaction detected (PLIP)MG.244: 4 residues within 4Å:- Chain e: G.979, C.980, G.1374, C.1375
No protein-ligand interaction detected (PLIP)MG.245: 2 residues within 4Å:- Chain e: C.1312, G.1313
No protein-ligand interaction detected (PLIP)MG.246: 1 residues within 4Å:- Chain e: A.945
No protein-ligand interaction detected (PLIP)MG.247: 2 residues within 4Å:- Chain e: A.1120, A.1121
No protein-ligand interaction detected (PLIP)MG.248: 4 residues within 4Å:- Chain e: C.1064, A.1205, A.1206, A.1207
No protein-ligand interaction detected (PLIP)MG.249: 3 residues within 4Å:- Chain e: G.971, A.972, U.1208
No protein-ligand interaction detected (PLIP)MG.250: 1 residues within 4Å:- Chain e: U.805
No protein-ligand interaction detected (PLIP)MG.251: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- 1 x EM1: (3aS,4R,7S,9R,10R,11R,13R,15R,15aR)-1-{4-[4-(3-aminophenyl)-1H-1,2,3-triazol-1-yl]butyl}-4-ethyl-7-fluoro-11-methoxy-3a ,7,9,11,13,15-hexamethyl-2,6,8,14-tetraoxotetradecahydro-2H-oxacyclotetradecino[4,3-d][1,3]oxazol-10-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside(Non-functional Binders)
- 18 x K: POTASSIUM ION(Non-functional Binders)
K.178: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.179: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPK.180: 3 residues within 4Å:- Chain 3: C.910, U.913, G.914
Ligand excluded by PLIPK.181: 4 residues within 4Å:- Chain 3: U.739, G.740, U.812, G.813
Ligand excluded by PLIPK.182: 4 residues within 4Å:- Chain 3: U.2655, A.2803, A.2808, G.2809
Ligand excluded by PLIPK.183: 4 residues within 4Å:- Chain 3: G.1695, C.1696, C.2033, A.2843
Ligand excluded by PLIPK.184: 2 residues within 4Å:- Chain 3: A.2293, U.2299
Ligand excluded by PLIPK.185: 1 residues within 4Å:- Chain 3: G.2277
Ligand excluded by PLIPK.186: 3 residues within 4Å:- Chain 3: A.198, A.199, A.200
Ligand excluded by PLIPK.187: 4 residues within 4Å:- Chain 3: C.2708, U.2711, G.2712, U.2751
Ligand excluded by PLIPK.188: 1 residues within 4Å:- Chain 3: A.880
Ligand excluded by PLIPK.189: 3 residues within 4Å:- Chain 3: G.294, G.295, G.296
Ligand excluded by PLIPK.190: 2 residues within 4Å:- Chain 3: C.188, G.189
Ligand excluded by PLIPK.191: 6 residues within 4Å:- Chain 3: C.1822, U.1823, C.1824, G.1849, G.1850, G.1851
Ligand excluded by PLIPK.192: 4 residues within 4Å:- Chain 3: U.1868, G.1869, G.1924, U.1925
Ligand excluded by PLIPK.252: 1 residues within 4Å:- Chain e: U.14
Ligand excluded by PLIPK.253: 5 residues within 4Å:- Chain e: C.379, U.382, G.383, U.394, A.396
Ligand excluded by PLIPK.254: 5 residues within 4Å:- Chain e: C.932, G.933, G.935, U.1399, U.1400
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rivalta, A. et al., Structural studies on ribosomes of differentially macrolide-resistant Staphylococcus aureus strains. LSA (2025)
- Release Date
- 2025-06-04
- Peptides
- Large ribosomal subunit protein bL33A: A
Large ribosomal subunit protein bL34: B
Large ribosomal subunit protein bL35: C
Large ribosomal subunit protein bL36: D
Large ribosomal subunit protein uL2: F
Large ribosomal subunit protein uL3: G
Large ribosomal subunit protein uL4: H
Large ribosomal subunit protein uL6: I
Large ribosomal subunit protein uL13: J
Large ribosomal subunit protein uL14: K
Large ribosomal subunit protein uL15: L
Large ribosomal subunit protein uL16: M
Large ribosomal subunit protein bL17: N
Large ribosomal subunit protein uL18: O
Large ribosomal subunit protein bL19: P
Large ribosomal subunit protein bL20: Q
Large ribosomal subunit protein bL21: R
Large ribosomal subunit protein uL22: S
Large ribosomal subunit protein uL23: T
Large ribosomal subunit protein uL24: U
50S ribosomal protein L25: V
Large ribosomal subunit protein bL27: W
Large ribosomal subunit protein bL28: X
Large ribosomal subunit protein uL29: Y
Large ribosomal subunit protein uL30: Z
Large ribosomal subunit protein bL32: 0
Large ribosomal subunit protein uL5: 1
Small ribosomal subunit protein uS5: 4
Small ribosomal subunit protein bS6: 5
Small ribosomal subunit protein uS7: 6
Small ribosomal subunit protein uS9: 7
Small ribosomal subunit protein uS12: 8
Small ribosomal subunit protein uS15: 9
Small ribosomal subunit protein bS16: a
Small ribosomal subunit protein uS17: b
Small ribosomal subunit protein bS18: c
Small ribosomal subunit protein bS20: d
Small ribosomal subunit protein uS10: f
Small ribosomal subunit protein uS3: g
Small ribosomal subunit protein uS13: h
Small ribosomal subunit protein uS11: i
Small ribosomal subunit protein uS2: j
Small ribosomal subunit protein uS8: k
Small ribosomal subunit protein uS4: l
Small ribosomal subunit protein uS14B: m
Small ribosomal subunit protein uS19: n
Large ribosomal subunit protein bL31B: q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3D
4F
CG
DH
EI
GJ
HK
IL
JM
KN
LO
MP
NQ
OR
PS
QT
RU
SV
TW
UX
VY
WZ
X0
Z1
F4
Ae5
Af6
Ag7
Ai8
Al9
Aoa
Apb
Aqc
Ard
Atf
Ajg
Ach
Ami
Akj
Abk
Ahl
Adm
Ann
Asq
13
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x U- A- C- A- A: A-site tRNA molecule(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
- 231 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
- 1 x EM1: (3aS,4R,7S,9R,10R,11R,13R,15R,15aR)-1-{4-[4-(3-aminophenyl)-1H-1,2,3-triazol-1-yl]butyl}-4-ethyl-7-fluoro-11-methoxy-3a ,7,9,11,13,15-hexamethyl-2,6,8,14-tetraoxotetradecahydro-2H-oxacyclotetradecino[4,3-d][1,3]oxazol-10-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside(Non-functional Binders)
- 18 x K: POTASSIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Rivalta, A. et al., Structural studies on ribosomes of differentially macrolide-resistant Staphylococcus aureus strains. LSA (2025)
- Release Date
- 2025-06-04
- Peptides
- Large ribosomal subunit protein bL33A: A
Large ribosomal subunit protein bL34: B
Large ribosomal subunit protein bL35: C
Large ribosomal subunit protein bL36: D
Large ribosomal subunit protein uL2: F
Large ribosomal subunit protein uL3: G
Large ribosomal subunit protein uL4: H
Large ribosomal subunit protein uL6: I
Large ribosomal subunit protein uL13: J
Large ribosomal subunit protein uL14: K
Large ribosomal subunit protein uL15: L
Large ribosomal subunit protein uL16: M
Large ribosomal subunit protein bL17: N
Large ribosomal subunit protein uL18: O
Large ribosomal subunit protein bL19: P
Large ribosomal subunit protein bL20: Q
Large ribosomal subunit protein bL21: R
Large ribosomal subunit protein uL22: S
Large ribosomal subunit protein uL23: T
Large ribosomal subunit protein uL24: U
50S ribosomal protein L25: V
Large ribosomal subunit protein bL27: W
Large ribosomal subunit protein bL28: X
Large ribosomal subunit protein uL29: Y
Large ribosomal subunit protein uL30: Z
Large ribosomal subunit protein bL32: 0
Large ribosomal subunit protein uL5: 1
Small ribosomal subunit protein uS5: 4
Small ribosomal subunit protein bS6: 5
Small ribosomal subunit protein uS7: 6
Small ribosomal subunit protein uS9: 7
Small ribosomal subunit protein uS12: 8
Small ribosomal subunit protein uS15: 9
Small ribosomal subunit protein bS16: a
Small ribosomal subunit protein uS17: b
Small ribosomal subunit protein bS18: c
Small ribosomal subunit protein bS20: d
Small ribosomal subunit protein uS10: f
Small ribosomal subunit protein uS3: g
Small ribosomal subunit protein uS13: h
Small ribosomal subunit protein uS11: i
Small ribosomal subunit protein uS2: j
Small ribosomal subunit protein uS8: k
Small ribosomal subunit protein uS4: l
Small ribosomal subunit protein uS14B: m
Small ribosomal subunit protein uS19: n
Large ribosomal subunit protein bL31B: q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3D
4F
CG
DH
EI
GJ
HK
IL
JM
KN
LO
MP
NQ
OR
PS
QT
RU
SV
TW
UX
VY
WZ
X0
Z1
F4
Ae5
Af6
Ag7
Ai8
Al9
Aoa
Apb
Aqc
Ard
Atf
Ajg
Ach
Ami
Akj
Abk
Ahl
Adm
Ann
Asq
13