9qeg.1 | SWISS-MODEL Template Library

SMTL ID : 9qeg.1

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

1 x U- A- C- A- A: A-site tRNA molecule(Non-functional Binders)

4 x ZN: ZINC ION(Non-covalent)

231 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

1 x EM1: (3aS,4R,7S,9R,10R,11R,13R,15R,15aR)-1-{4-[4-(3-aminophenyl)-1H-1,2,3-triazol-1-yl]butyl}-4-ethyl-7-fluoro-11-methoxy-3a ,7,9,11,13,15-hexamethyl-2,6,8,14-tetraoxotetradecahydro-2H-oxacyclotetradecino[4,3-d][1,3]oxazol-10-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside(Non-functional Binders)

18 x K: POTASSIUM ION(Non-functional Binders)

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Rivalta, A. et al., Structural studies on ribosomes of differentially macrolide-resistant Staphylococcus aureus strains. Life Sci Alliance (2025)

Release Date

2025-06-04

Peptides

Large ribosomal subunit protein bL33A: A
Large ribosomal subunit protein bL34: B
Large ribosomal subunit protein bL35: C
Large ribosomal subunit protein bL36: D
Large ribosomal subunit protein uL2: F
Large ribosomal subunit protein uL3: G
Large ribosomal subunit protein uL4: H
Large ribosomal subunit protein uL6: I
Large ribosomal subunit protein uL13: J
Large ribosomal subunit protein uL14: K
Large ribosomal subunit protein uL15: L
Large ribosomal subunit protein uL16: M
Large ribosomal subunit protein bL17: N
Large ribosomal subunit protein uL18: O
Large ribosomal subunit protein bL19: P
Large ribosomal subunit protein bL20: Q
Large ribosomal subunit protein bL21: R
Large ribosomal subunit protein uL22: S
Large ribosomal subunit protein uL23: T
Large ribosomal subunit protein uL24: U
50S ribosomal protein L25: V
Large ribosomal subunit protein bL27: W
Large ribosomal subunit protein bL28: X
Large ribosomal subunit protein uL29: Y
Large ribosomal subunit protein uL30: Z
Large ribosomal subunit protein bL32: 0
Large ribosomal subunit protein uL5: 1
Small ribosomal subunit protein uS5: 4
Small ribosomal subunit protein bS6: 5
Small ribosomal subunit protein uS7: 6
Small ribosomal subunit protein uS9: 7
Small ribosomal subunit protein uS12: 8
Small ribosomal subunit protein uS15: 9
Small ribosomal subunit protein bS16: a
Small ribosomal subunit protein uS17: b
Small ribosomal subunit protein bS18: c
Small ribosomal subunit protein bS20: d
Small ribosomal subunit protein uS10: f
Small ribosomal subunit protein uS3: g
Small ribosomal subunit protein uS13: h
Small ribosomal subunit protein uS11: i
Small ribosomal subunit protein uS2: j
Small ribosomal subunit protein uS8: k
Small ribosomal subunit protein uS4: l
Small ribosomal subunit protein uS14B: m
Small ribosomal subunit protein uS19: n
Large ribosomal subunit protein bL31B: q

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

F
C

G
D

H
E

I
G

J
H

K
I

L
J

M
K

N
L

O
M

P
N

Q
O

R
P

S
Q

T
R

U
S

V
T

W
U

X
V

Y
W

Z
X

0
Z

1
F

4
Ae

5
Af

6
Ag

7
Ai

8
Al

9
Ao

a
Ap

b
Aq

c
Ar

d
At

f
Aj

g
Ac

h
Am

i
Ak

j
Ab

k
Ah

l
Ad

m
An

n
As

q
13

Large ribosomal subunit protein bL33A

Large ribosomal subunit protein bL34

Large ribosomal subunit protein bL35

Large ribosomal subunit protein bL36

Large ribosomal subunit protein uL2

Large ribosomal subunit protein uL3

Large ribosomal subunit protein uL4

Large ribosomal subunit protein uL6

Large ribosomal subunit protein uL13

Large ribosomal subunit protein uL14

Large ribosomal subunit protein uL15

Large ribosomal subunit protein uL16

Large ribosomal subunit protein bL17

Large ribosomal subunit protein uL18

Large ribosomal subunit protein bL19

Large ribosomal subunit protein bL20

Large ribosomal subunit protein bL21

Large ribosomal subunit protein uL22

Large ribosomal subunit protein uL23

Large ribosomal subunit protein uL24

50S ribosomal protein L25

Large ribosomal subunit protein bL27

Large ribosomal subunit protein bL28

Large ribosomal subunit protein uL29

Large ribosomal subunit protein uL30

Large ribosomal subunit protein bL32

Large ribosomal subunit protein uL5

Small ribosomal subunit protein uS5

Small ribosomal subunit protein bS6

Small ribosomal subunit protein uS7

Small ribosomal subunit protein uS9

Small ribosomal subunit protein uS12

Small ribosomal subunit protein uS15

Small ribosomal subunit protein bS16

Small ribosomal subunit protein uS17

Small ribosomal subunit protein bS18

Small ribosomal subunit protein bS20

Small ribosomal subunit protein uS10

Small ribosomal subunit protein uS3

Small ribosomal subunit protein uS13

Small ribosomal subunit protein uS11

Small ribosomal subunit protein uS2

Small ribosomal subunit protein uS8

Small ribosomal subunit protein uS4

Small ribosomal subunit protein uS14B

Small ribosomal subunit protein uS19

Large ribosomal subunit protein bL31B

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