SMTL ID : 9ri9.1

Cryo-EM structure of the tomato NRC3 hexameric resistosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 19 residues within 4Å: Chain A: V.150, E.151, D.154, V.155, V.156, F.158, G.186, L.187, G.188, K.189, T.190, T.191, D.266, R.294, L.320, P.350, L.351, V.354, L.392 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:E.151, A:V.156, A:V.156, A:G.186, A:G.188, A:K.189, A:T.190, A:T.190, A:T.191, A:T.191, A:D.266 Salt bridges: A:K.189, A:K.189, A:R.294 ATP.2: 19 residues within 4Å: Chain B: V.150, E.151, D.154, V.155, V.156, F.158, G.186, L.187, G.188, K.189, T.190, T.191, D.266, R.294, L.320, P.350, L.351, V.354, L.392 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:E.151, B:V.156, B:V.156, B:G.186, B:G.188, B:K.189, B:T.190, B:T.190, B:T.191, B:T.191, B:D.266 Salt bridges: B:K.189, B:K.189, B:R.294 ATP.3: 19 residues within 4Å: Chain C: V.150, E.151, D.154, V.155, V.156, F.158, G.186, L.187, G.188, K.189, T.190, T.191, D.266, R.294, L.320, P.350, L.351, V.354, L.392 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:E.151, C:V.156, C:V.156, C:G.186, C:G.188, C:K.189, C:T.190, C:T.190, C:T.191, C:T.191, C:D.266 Salt bridges: C:K.189, C:K.189, C:R.294 ATP.4: 19 residues within 4Å: Chain D: V.150, E.151, D.154, V.155, V.156, F.158, G.186, L.187, G.188, K.189, T.190, T.191, D.266, R.294, L.320, P.350, L.351, V.354, L.392 14 PLIP interactions: 14 interactions with chain D Hydrogen bonds: D:E.151, D:V.156, D:V.156, D:G.186, D:G.188, D:K.189, D:T.190, D:T.190, D:T.191, D:T.191, D:D.266 Salt bridges: D:K.189, D:K.189, D:R.294 ATP.5: 19 residues within 4Å: Chain E: V.150, E.151, D.154, V.155, V.156, F.158, G.186, L.187, G.188, K.189, T.190, T.191, D.266, R.294, L.320, P.350, L.351, V.354, L.392 14 PLIP interactions: 14 interactions with chain E Hydrogen bonds: E:E.151, E:V.156, E:V.156, E:G.186, E:G.188, E:K.189, E:T.190, E:T.190, E:T.191, E:T.191, E:D.266 Salt bridges: E:K.189, E:K.189, E:R.294 ATP.6: 19 residues within 4Å: Chain F: V.150, E.151, D.154, V.155, V.156, F.158, G.186, L.187, G.188, K.189, T.190, T.191, D.266, R.294, L.320, P.350, L.351, V.354, L.392 14 PLIP interactions: 14 interactions with chain F Hydrogen bonds: F:E.151, F:V.156, F:V.156, F:G.186, F:G.188, F:K.189, F:T.190, F:T.190, F:T.191, F:T.191, F:D.266 Salt bridges: F:K.189, F:K.189, F:R.294

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seager, B.A. et al., Cryo-EM structure of the tomato NRC3 hexameric resistosome. To Be Published

Release Date

2025-07-23

Peptides

SlNRC3: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

C
G

D
I

E
J

F
L

SlNRC3

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