✓
| 6z4u.1.A | Protein 9b
X-ray Crystallographic Structure of Orf9b from SARS-CoV-2 | 0.74 | 0.66 | 100.00 | 1.00 | 1-97 | X-ray | 1.95 | homo-dimer | | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 6z4u.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 6z4u.1 LATTEELPDEFVVVTVK
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| 6z4u.1.B | Protein 9b
X-ray Crystallographic Structure of Orf9b from SARS-CoV-2 | 0.73 | 0.65 | 100.00 | 1.00 | 1-97 | X-ray | 1.95 | homo-dimer | | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 6z4u.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 6z4u.1 LATTEELPDEFVVVTVK
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| 7kdt.1.B | ORF9b protein
Human Tom70 in complex with SARS CoV2 Orf9b | 0.32 | 0.00 | 100.00 | 1.00 | 1-97 | EM | 0.00 | monomer | | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7kdt.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7kdt.1 LATTEELPDEFVVVTVK
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| 7dhg.1.B | ORF9b protein
Crystal structure of SARS-CoV-2 Orf9b complex with human TOM70 | 0.27 | 0.00 | 100.00 | 1.00 | 1-97 | X-ray | 2.20 | monomer | | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7dhg.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7dhg.1 LATTEELPDEFVVVTVK
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| 7ye7.1.A | ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b | 0.67 | 0.69 | 100.00 | 1.00 | 1-97 | X-ray | 2.95 | homo-dimer | 1 x DD9 | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye7.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye7.1 LATTEELPDEFVVVTVK
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| 7ye8.1.A | ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b | 0.71 | 0.69 | 100.00 | 1.00 | 1-97 | X-ray | 3.01 | homo-dimer | 1 x OCT | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye8.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye8.1 LATTEELPDEFVVVTVK
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| 7ye7.1.B | ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b | 0.71 | 0.70 | 100.00 | 1.00 | 1-97 | X-ray | 2.95 | homo-dimer | 1 x DD9 | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye7.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye7.1 LATTEELPDEFVVVTVK
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| 7ye7.2.A | ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b | 0.68 | 0.66 | 100.00 | 1.00 | 1-97 | X-ray | 2.95 | homo-dimer | 1 x OCT | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye7.2 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye7.2 LATTEELPDEFVVVTVK
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| 7ye8.2.A | ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b | 0.69 | | 100.00 | 1.00 | 1-97 | X-ray | 3.01 | homo-dimer | 1 x OCT | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye8.2 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye8.2 LATTEELPDEFVVVTVK
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| 7ye7.2.B | ORF9b protein
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b | 0.71 | | 100.00 | 1.00 | 1-97 | X-ray | 2.95 | homo-dimer | 1 x OCT | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye7.2 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye7.2 LATTEELPDEFVVVTVK
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| 7ye8.2.B | ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b | 0.70 | | 100.00 | 1.00 | 1-97 | X-ray | 3.01 | homo-dimer | 1 x OCT | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye8.2 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye8.2 LATTEELPDEFVVVTVK
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| 7ye8.1.B | ORF9b protein
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b | 0.77 | | 100.00 | 1.00 | 1-97 | X-ray | 3.01 | homo-dimer | 1 x OCT | HHblits | 0.60 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7ye8.1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK
target LATTEELPDEFVVVTVK 7ye8.1 LATTEELPDEFVVVTVK
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| 2cme.1.B | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.61 | 0.00 | 78.48 | 0.81 | 8-97 | X-ray | 2.80 | monomer | 1 x D10 | HHblits | 0.52 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.1 -------VPPALHLVDPQIQLTITR-----------ADPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.1 LATTEELPDEFVVVTAK
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| 2cme.1.B | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.60 | 0.00 | 80.52 | 0.79 | 10-97 | X-ray | 2.80 | monomer | 1 x D10 | BLAST | 0.53 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.1 ---------PALHLVDPQIQLTITRAD-----------PKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.1 LATTEELPDEFVVVTAK
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| 2cme.1.A | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.61 | 0.00 | 78.21 | 0.80 | 8-97 | X-ray | 2.80 | monomer | 1 x D10 | HHblits | 0.52 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.1 -------VPPALHLVDPQIQLTIT------------ADPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.1 LATTEELPDEFVVVTAK
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| 2cme.3.A | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.61 | 0.00 | 79.22 | 0.79 | 8-97 | X-ray | 2.80 | monomer | 1 x D10 | HHblits | 0.52 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.3 -------VPPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.3 LATTEELPDEFVVVTAK
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| 2cme.1.A | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.60 | 0.00 | 80.26 | 0.78 | 10-97 | X-ray | 2.80 | monomer | 1 x D10 | BLAST | 0.53 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.1 ---------PALHLVDPQIQLTIT------------ADPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.1 LATTEELPDEFVVVTAK
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| 2cme.2.A | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.59 | 0.54 | 80.26 | 0.78 | 9-97 | X-ray | 2.80 | homo-dimer | 1 x D10 | HHblits | 0.53 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.2 --------PPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.2 LATTEELPDEFVVVTAK
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✓
| 2cme.2.A | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.58 | 0.54 | 81.33 | 0.77 | 10-97 | X-ray | 2.80 | homo-dimer | 1 x D10 | BLAST | 0.53 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.2 ---------PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.2 LATTEELPDEFVVVTAK
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| 2cme.3.A | HYPOTHETICAL PROTEIN 5
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN | 0.59 | 0.00 | 81.33 | 0.77 | 10-97 | X-ray | 2.80 | monomer | 1 x D10 | BLAST | 0.53 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2cme.3 ---------PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTK
target LATTEELPDEFVVVTVK 2cme.3 LATTEELPDEFVVVTAK
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| 2aus.2.A | pseudouridine synthase
Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex | 0.09 | | 17.95 | 0.40 | 38-76 | X-ray | 2.10 | hetero-1-1-mer | 1 x ZN | HHblits | 0.31 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2aus.2 -------------------------------------AGKEYVALMHLHGDVPEDKIRAVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 2aus.2 -----------------
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| 2aus.1.A | pseudouridine synthase
Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex | 0.09 | | 17.95 | 0.40 | 38-76 | X-ray | 2.10 | hetero-2-2-mer | 2 x ZN | HHblits | 0.31 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2aus.1 -------------------------------------AGKEYVALMHLHGDVPEDKIRAVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 2aus.1 -----------------
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| 3mqk.1.A | tRNA pseudouridine synthase B
Cbf5-Nop10-Gar1 complex binding with 17mer RNA containing ACA trinucleotide | 0.10 | | 15.38 | 0.40 | 38-76 | X-ray | 2.80 | hetero-oligomer | 1 x C-G-A-U-C-C-A-C-A | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 3mqk.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 3mqk.1 -----------------
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| 2rfk.1.D | Probable tRNA pseudouridine synthase B
Substrate RNA Positioning in the Archaeal H/ACA Ribonucleoprotein Complex | 0.06 | | 15.38 | 0.40 | 38-76 | X-ray | 2.87 | hetero-1-1-1-mer | 1 x ZN | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2rfk.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 2rfk.1 -----------------
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| 3lwo.1.A | Pseudouridine synthase Cbf5
Structure of H/ACA RNP bound to a substrate RNA containing 5BrU | 0.08 | | 15.38 | 0.40 | 38-76 | X-ray | 2.86 | hetero-oligomer | 1 x ZN | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 3lwo.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 3lwo.1 -----------------
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| 3hax.1.A | Probable tRNA pseudouridine synthase B
Crystal structure of a substrate-bound Gar1-minus H/ACA RNP from Pyrococcus furiosus | 0.10 | | 15.38 | 0.40 | 38-76 | X-ray | 2.11 | hetero-1-1-1-mer | 1 x ZN | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 3hax.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 3hax.1 -----------------
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| 2hvy.1.B | Probable tRNA pseudouridine synthase B
Crystal structure of an H/ACA box RNP from Pyrococcus furiosus | 0.09 | | 15.38 | 0.40 | 38-76 | X-ray | 2.30 | hetero-1-1-1-1-mer | 1 x ATP, 1 x ZN | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2hvy.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 2hvy.1 -----------------
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| 3hjw.1.A | Pseudouridine synthase Cbf5
Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA | 0.10 | | 15.38 | 0.40 | 38-76 | X-ray | 2.35 | hetero-1-1-1-mer | 1 x ZN, 1 x K | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 3hjw.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 3hjw.1 -----------------
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| 3hjy.1.A | pseudouridine synthase CBf5
Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA | 0.09 | | 15.38 | 0.40 | 38-76 | X-ray | 3.65 | hetero-1-1-mer | | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 3hjy.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRS----
target LATTEELPDEFVVVTVK 3hjy.1 -----------------
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| 2apo.1.A | Probable tRNA pseudouridine synthase B
Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex | 0.09 | | 18.42 | 0.39 | 38-75 | X-ray | 1.95 | hetero-oligomer | 1 x ZN, 2 x K | HHblits | 0.31 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2apo.1 -------------------------------------PPKEYVCLMHLHRDASEEDILRVFKEFTGRIYQRPPLK-----
target LATTEELPDEFVVVTVK 2apo.1 -----------------
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| 2ey4.1.A | Probable tRNA pseudouridine synthase B
Crystal Structure of a Cbf5-Nop10-Gar1 Complex | 0.06 | | 15.79 | 0.39 | 38-75 | X-ray | 2.11 | hetero-1-1-1-mer | 1 x ZN | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2ey4.1 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLR-----
target LATTEELPDEFVVVTVK 2ey4.1 -----------------
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| 2ey4.2.A | Probable tRNA pseudouridine synthase B
Crystal Structure of a Cbf5-Nop10-Gar1 Complex | 0.07 | | 15.79 | 0.39 | 38-75 | X-ray | 2.11 | hetero-1-1-1-mer | 1 x ZN | HHblits | 0.30 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 2ey4.2 -------------------------------------AGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLR-----
target LATTEELPDEFVVVTVK 2ey4.2 -----------------
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| 7qep.17.A | 40S ribosomal protein S25
Cryo-EM structure of the ribosome from Encephalitozoon cuniculi | 0.00 | | 26.32 | 0.20 | 51-69 | EM | 0.00 | monomer | | HHblits | 0.34 |
target MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTK 7qep.17 --------------------------------------------------NLNLGVAENVLRHLSNEGV-----------
target LATTEELPDEFVVVTVK 7qep.17 -----------------
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