| 8dqu.1.C | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.G | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.W | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.K | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.O | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.S | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.66 | 0.65 | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7bwq.1.B | Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.84 | 0.92 | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7bwq.1.A | Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.87 | 0.92 | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7bwq.2.B | Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.85 | | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7bwq.2.A | Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.84 | | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7bwq.3.A | Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.84 | | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7thm.1.E | Non-structural protein 9
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9 | 0.60 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-1-mer | 2 x ZN, 1 x MN, 1 x POP | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7thm.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7thm.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwi.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwi.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwi.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwn.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwn.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwn.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7eiz.1.E | Non-structural protein 9
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading | 0.82 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-1-1-1-… | 13 x ZN, 1 x MG | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7eiz.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7eiz.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7bwq.3.B | Nsp9
Structure of nonstructural protein Nsp9 from SARS-CoV-2 | 0.87 | | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7bwq.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7bwq.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.P | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.62 | | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.T | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.62 | | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.D | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.62 | | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.H | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.62 | | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.L | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.62 | | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8dqu.1.X | Non-structural protein 9
Nanobody bound SARS-CoV-2 Nsp9 | 0.62 | | 100.00 | 1.00 | 1-113 | X-ray | 2.45 | hetero-12-12-mer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8dqu.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8dqu.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwo.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.81 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwo.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwo.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6wc1.1.A | SARS-coV-2 Non-structural protein 9
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 | | 100.00 | 1.00 | 1-113 | X-ray | 2.40 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wc1.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wc1.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6wxd.1.A | Non-structural protein 9
SARS-CoV-2 Nsp9 RNA-replicase | 0.90 | | 100.00 | 1.00 | 1-113 | X-ray | 2.00 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wxd.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wxd.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6wc1.1.B | SARS-coV-2 Non-structural protein 9
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 | | 100.00 | 1.00 | 1-113 | X-ray | 2.40 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wc1.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wc1.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6wxd.1.B | Non-structural protein 9
SARS-CoV-2 Nsp9 RNA-replicase | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 2.00 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6wxd.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6wxd.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwg.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwg.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwg.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwf.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwf.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwf.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwe.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.77 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP, 1 x MG, 1 x A-U-U-A | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwe.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwe.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
✓
| 6w4b.1.B | Non-structural protein 9
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2 | 0.88 | 0.94 | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w4b.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w4b.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7cyq.1.I | Non-structural protein 9
Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis | 0.83 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GDP, 1 x MG | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7cyq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7cyq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6w4b.1.A | Non-structural protein 9
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 2.95 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w4b.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w4b.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 8gwb.1.I | Non-structural protein 9
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.82 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 2 x MN, 1 x A-U | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 8gwb.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 8gwb.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7egq.1.F | Non-structural protein 9
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | 0.83 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-2-4-2-4-2-2-… | 26 x ZN, 3 x MG | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7egq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7egq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7egq.1.N | Non-structural protein 9
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | 0.82 | | 100.00 | 1.00 | 1-113 | EM | 0.00 | hetero-2-4-2-4-2-2-… | 26 x ZN, 3 x MG | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7egq.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7egq.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6w9q.1.A | 3C-like proteinase peptide, Non-structural protein 9 fusion
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 | | 100.00 | 1.00 | 1-113 | X-ray | 2.05 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w9q.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w9q.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 6w9q.1.B | 3C-like proteinase peptide, Non-structural protein 9 fusion
Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 | | 100.00 | 1.00 | 1-113 | X-ray | 2.05 | homo-dimer | | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 6w9q.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6w9q.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7kri.1.C | Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 | | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7kri.1.F | Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.87 | | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7kri.1.E | Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 | | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7kri.1.B | Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.89 | | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7kri.1.D | Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.86 | | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7kri.1.A | Non-structural protein 9
FR6-bound SARS-CoV-2 Nsp9 RNA-replicase | 0.86 | | 100.00 | 1.00 | 1-113 | X-ray | 1.58 | homo-hexamer | 12 x X0Y | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7kri.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7kri.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.2.B | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.4.B | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.4 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.4 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.4.A | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.4 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.4 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.2.A | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.2 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.3.A | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.89 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.1.A | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.89 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.1.B | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 7n3k.3.B | Non-structural protein 9
Oridonin-bound SARS-CoV-2 Nsp9 | 0.88 | | 100.00 | 1.00 | 1-113 | X-ray | 3.00 | homo-dimer | 2 x ODN | HHblits | 0.62 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 7n3k.3 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 7n3k.3 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 1qz8.1.A | polyprotein 1ab
Crystal structure of SARS coronavirus NSP9 | 0.88 | | 97.35 | 1.00 | 1-113 | X-ray | 2.70 | homo-dimer | | HHblits | 0.61 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1qz8.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1qz8.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
✓
| 1qz8.1.B | polyprotein 1ab
Crystal structure of SARS coronavirus NSP9 | 0.87 | 0.92 | 97.35 | 1.00 | 1-113 | X-ray | 2.70 | homo-dimer | | HHblits | 0.61 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1qz8.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1qz8.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
✓
| 1uw7.1.A | NSP9
Nsp9 protein from SARS-coronavirus. | 0.85 | 0.91 | 97.35 | 1.00 | 1-113 | X-ray | 2.80 | homo-dimer | | HHblits | 0.61 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1uw7.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1uw7.1 KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
|
| 3ee7.1.B | Replicase polyprotein 1a
Crystal Structure of SARS-CoV nsp9 G104E | 0.86 | | 96.46 | 1.00 | 1-113 | X-ray | 2.60 | homo-dimer | | HHblits | 0.60 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ee7.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ee7.1 KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
|
| 3ee7.1.A | Replicase polyprotein 1a
Crystal Structure of SARS-CoV nsp9 G104E | 0.85 | | 96.46 | 1.00 | 1-113 | X-ray | 2.60 | homo-dimer | | HHblits | 0.60 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ee7.1 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ee7.1 KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
|
| 3ee7.2.B | Replicase polyprotein 1a
Crystal Structure of SARS-CoV nsp9 G104E | 0.86 | | 96.46 | 1.00 | 1-113 | X-ray | 2.60 | homo-dimer | | HHblits | 0.60 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ee7.2 NNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ee7.2 KGPKVKYLYFIKGLNNLNRGMVLESLAATVRLQ
|
| 2j97.1.A | REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 (Nsp9) | 0.61 | | 45.87 | 0.96 | 1-113 | X-ray | 1.75 | homo-dimer | | BLAST | 0.43 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j97.1 NNEIMPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPCRFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j97.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
| 2j98.1.B | REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.62 | | 44.95 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | BLAST | 0.42 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIKPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
| 2j98.1.A | REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.63 | | 44.95 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | BLAST | 0.42 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIMPGKMKVKATKGEGDGGITSEGNAL--YNNEGGRAFMYAYVTTKPGMKYVKWEHDSGVVTV--ELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
| 2j97.1.A | REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 (Nsp9) | 0.68 | | 44.04 | 0.96 | 1-113 | X-ray | 1.75 | homo-dimer | | HHblits | 0.42 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j97.1 NNEIMPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPCRFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j97.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
| 2j98.1.B | REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.67 | | 43.12 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | HHblits | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIKPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
| 2j98.1.A | REPLICASE POLYPROTEIN 1AB
Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) | 0.70 | | 43.12 | 0.96 | 1-113 | X-ray | 1.80 | hetero-1-1-mer | 1 x DTT | HHblits | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2j98.1 NNEIMPGKMKVKATKGEGDG-GITS-EGNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD--SGVVTVELEPPARFVIDTP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2j98.1 TGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
|
| 5c94.1.A | Non-structural protein 9
Infectious bronchitis virus nsp9 | 0.69 | | 39.64 | 0.98 | 1-113 | X-ray | 2.44 | homo-dimer | | BLAST | 0.39 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5c94.1 NNELMPHGVKTKACVAGVDQAHCSVESK-CYYTSISGSSVVAAITSSNPNLKVASFLNEAGN-QIYVDLDPPCKFGMKVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5c94.1 DKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
|
| 5c94.1.A | Non-structural protein 9
Infectious bronchitis virus nsp9 | 0.70 | | 39.64 | 0.98 | 1-113 | X-ray | 2.44 | homo-dimer | | HHblits | 0.39 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5c94.1 NNELMPHGVKTKACVAGVDQAHCSV-ESKCYYTSISGSSVVAAITSSNPNLKVASFLNEAGN-QIYVDLDPPCKFGMKVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5c94.1 DKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
|
| 5hiy.2.A | Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A | 0.61 | | 45.37 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer | | BLAST | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.2 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.2 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiy.1.B | Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A | 0.64 | | 45.37 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer | | BLAST | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiy.1.A | Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A | 0.62 | | 45.37 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer | | BLAST | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGANTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiz.1.A | Non-structural protein 9
The structure of PEDV NSP9 | 0.60 | | 45.37 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer | | BLAST | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGCNTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiz.1.B | Non-structural protein 9
The structure of PEDV NSP9 | 0.60 | | 45.37 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer | | BLAST | 0.41 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKA---EGDGIVGEGKALYNNEGGRTFMYAFISDKPDLRVVKWEFDGGCNTI--ELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiy.2.A | Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A | 0.61 | | 43.52 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer | | HHblits | 0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.2 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.2 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiy.1.B | Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A | 0.64 | | 43.52 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer | | HHblits | 0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiy.1.A | Non-structural protein 9
Crystal structure of PEDV NSP9 Mutant-C59A | 0.61 | | 43.52 | 0.96 | 1-113 | X-ray | 3.00 | homo-dimer | | HHblits | 0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiy.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGANTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiy.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiz.1.A | Non-structural protein 9
The structure of PEDV NSP9 | 0.61 | | 43.52 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer | | HHblits | 0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGCNTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5hiz.1.B | Non-structural protein 9
The structure of PEDV NSP9 | 0.60 | | 43.52 | 0.96 | 1-113 | X-ray | 2.90 | homo-dimer | | HHblits | 0.40 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5hiz.1 NNEIIPGKLKQRSIKAEGDG-IVG--EGKALYNNEGGRTFMYAFISDKPDLRVVKWEFD--GGCNTIELEPPRKFLVDSP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5hiz.1 NGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
|
| 5ym6.1.A | nsp9
Crystal Structure of porcine delta coronavirus nsp9 | 0.51 | | 36.11 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer | | BLAST | 0.38 |
target NNELSPVALRQMSCAAGTTQTACTDDNAL-AYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNEL---CLRNVFTAQNTAQDFNGNESTVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
| 5ym6.1.B | nsp9
Crystal Structure of porcine delta coronavirus nsp9 | 0.54 | | 36.11 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer | | BLAST | 0.38 |
target NNELSPVALRQMSCAAGTTQTACTDDNAL-AYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNEL---CLRNVFTAQNTAQDFNGNESTVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
| 5ym6.1.A | nsp9
Crystal Structure of porcine delta coronavirus nsp9 | 0.57 | | 32.41 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer | | HHblits | 0.35 |
target NNELSP-VALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNELCLRNVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
| 5ym6.1.B | nsp9
Crystal Structure of porcine delta coronavirus nsp9 | 0.59 | | 32.41 | 0.96 | 1-113 | X-ray | 1.80 | homo-dimer | | HHblits | 0.35 |
target NNELSP-VALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDT 5ym6.1 NNELCLRNVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTV
target PKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym6.1 GGKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
| 5ym8.1.A | nsp9
Crystal Structure of porcine delta coronavirus nsp9-N7 | 0.55 | | 30.39 | 0.90 | 7-113 | X-ray | 1.99 | monomer | | HHblits | 0.35 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5ym8.1 ------NVFTAQNTAQDFN-GNES--TVKSFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym8.1 GKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
| 5ym8.1.A | nsp9
Crystal Structure of porcine delta coronavirus nsp9-N7 | 0.44 | | 36.59 | 0.73 | 30-113 | X-ray | 1.99 | monomer | | BLAST | 0.38 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 5ym8.1 -----------------------------SFYVTRTGKKILVAITSTKDNLKTVTCLTE--TGKTVLNLDPPMRFAHTVG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5ym8.1 GKQSVVYLYFIQNISSLNRGMVIGHISETTILQ
|
| 2p5p.1.A | Genome polyprotein
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III | 0.09 | | 19.51 | 0.36 | 62-109 | X-ray | 2.80 | monomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2p5p.1 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2p5p.1 GRGEQQINHHWH-------KSGSSIGKAFTT----
|
| 2p5p.2.A | Genome polyprotein
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III | 0.08 | | 19.51 | 0.36 | 62-109 | X-ray | 2.80 | monomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2p5p.2 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2p5p.2 GRGEQQINHHWH-------KSGSSIGKAFTT----
|
| 2p5p.3.A | Genome polyprotein
Crystal Structure Analysis of the West Nile virus envelope (E) protein domain III | 0.08 | | 19.51 | 0.36 | 62-109 | X-ray | 2.80 | monomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2p5p.3 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2p5p.3 GRGEQQINHHWH-------KSGSSIGKAFTT----
|
| 3uzv.1.A | envelope protein
Crystal structure of the dengue virus serotype 2 envelope protein domain III in complex with the variable domains of Mab 4E11 | 0.07 | | 21.62 | 0.33 | 62-105 | X-ray | 2.10 | hetero-oligomer | | HHblits | 0.33 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3uzv.1 -------------------------------------------------------------DSPVNIEAEPPFGDSYIII
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3uzv.1 GVEPGQLKLNWF-------KKGSSIGQ--------
|
| 3uzq.1.B | envelope protein
Crystal structure of the dengue virus serotype 1 envelope protein domain III in complex with the variable domains of Mab 4E11 | 0.07 | | 21.62 | 0.33 | 62-105 | X-ray | 1.60 | hetero-oligomer | 1 x MES | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3uzq.1 -------------------------------------------------------------EKPVNIETEPPFGESYIIV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3uzq.1 GAGEKALKLSWF-------KKGSSIGK--------
|
| 3uyp.1.B | Envelope protein
Crystal structure of the dengue virus serotype 4 envelope protein domain III in complex with the variable domains of Mab 4E11 | 0.07 | | 21.62 | 0.33 | 62-105 | X-ray | 2.00 | hetero-oligomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3uyp.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3uyp.1 GVGDSALTLHWF-------RKGSSIGK--------
|
| 5aaw.4.B | DENGUE SEROTYPE 4 ENVELOPE PROTEIN DOMAIN 3
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | 0.06 | | 25.00 | 0.28 | 62-93 | X-ray | 3.27 | hetero-oligomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5aaw.4 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5aaw.4 GVGNSALTLHWFRKG--------------------
|
| 5aam.1.B | ENVELOPE PROTEIN
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | 0.06 | | 25.00 | 0.28 | 62-93 | X-ray | 2.49 | hetero-oligomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5aam.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5aam.1 GVGNSALTLHWFRKG--------------------
|
| 5aam.2.B | ENVELOPE PROTEIN
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | 0.06 | | 25.00 | 0.28 | 62-93 | X-ray | 2.49 | hetero-oligomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5aam.2 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5aam.2 GVGNSALTLHWFRKG--------------------
|
| 4x42.1.A | Envelope protein E
Crystal structure of DEN4 ED3 mutant with epitope two residues substituted from DEN3 ED3 | 0.06 | | 25.81 | 0.27 | 62-92 | X-ray | 2.78 | homo-dimer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4x42.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4x42.1 GVGDKALKLNWFRK---------------------
|
| 4ffy.1.C | envelope glycoprotein
Crystal structure of DENV1-E111 single chain variable fragment bound to DENV-1 DIII, strain 16007. | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.50 | hetero-oligomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4ffy.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4ffy.1 GAGEKALKLSWFKK---------------------
|
| 4l5f.1.B | Envelope protein
Crystal Structure of DENV1-E106 Fab bound to DENV-1 Envelope protein DIII | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.45 | hetero-oligomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4l5f.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4l5f.1 GAGEKALKLSWFKK---------------------
|
| 5vic.1.C | Dengue 1 Envelope DIII domain
Crystal structure of anti-Zika antibody Z004 bound to DENV-1 Envelope protein DIII | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 3.00 | hetero-oligomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5vic.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5vic.1 GAGEKALKLSWFKK---------------------
|
| 6dfj.1.C | Dengue 1 Envelope DIII domain
Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.07 | hetero-1-1-1-mer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6dfj.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6dfj.1 GAGEKALKLSWFKK---------------------
|
| 3irc.1.A | ENVELOPE PROTEIN
Crystal structure analysis of dengue-1 envelope protein domain III | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.25 | monomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3irc.1 -------------------------------------------------------------EKPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3irc.1 GAGEKALKLSWFKK---------------------
|
| 3we1.1.A | Envelope protein E
Crystal structure of Dengue 4 Envelope protein domain III (ED3) | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.28 | homo-dimer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3we1.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3we1.1 GVGNSALTLHWFRK---------------------
|
| 5b1c.1.A | Envelope protein E
Crystal structure of DEN4 ED3 mutant with L387I | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.00 | homo-dimer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5b1c.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5b1c.1 GVGNSALTIHWFRK---------------------
|
| 4bz1.1.A | ENVELOPE PROTEIN
Structure of dengue virus EDIII in complex with Fab 3e31 | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 2.15 | hetero-oligomer | 1 x ZN | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4bz1.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4bz1.1 GVGDSALTLHWFRK---------------------
|
| 4am0.1.C | ENVELOPE PROTEIN,
Structure of Dengue virus strain 4 DIII in complex with Fab 2H12 | 0.06 | | 22.58 | 0.27 | 62-92 | X-ray | 3.02 | hetero-1-1-1-mer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4am0.1 -------------------------------------------------------------NSVTNIELEPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4am0.1 GVGDSALTLHWFRK---------------------
|
| 1s6n.1.A | envelope glycoprotein
NMR Structure of Domain III of the West Nile Virus Envelope Protein, Strain 385-99 | 0.05 | | 16.13 | 0.27 | 62-92 | NMR | 0.00 | monomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 1s6n.1 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1s6n.1 GRGEQQINHHWHKS---------------------
|
| 1ztx.1.A | Envelope protein
West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab | 0.07 | | 16.13 | 0.27 | 62-92 | X-ray | 2.50 | hetero-oligomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 1ztx.1 -------------------------------------------------------------NAKVLIELEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1ztx.1 GRGEQQINHHWHKS---------------------
|
| 6s93.1.A | Genome polyprotein
Crystal structure of group B of Usutu virus envelope protein domain III | 0.07 | | 12.90 | 0.27 | 62-92 | X-ray | 1.67 | monomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s93.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s93.1 GRGDKQINHHWHKA---------------------
|
| 6s93.2.A | Genome polyprotein
Crystal structure of group B of Usutu virus envelope protein domain III | 0.07 | | 12.90 | 0.27 | 62-92 | X-ray | 1.67 | monomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s93.2 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s93.2 GRGDKQINHHWHKA---------------------
|
| 6s93.3.A | Genome polyprotein
Crystal structure of group B of Usutu virus envelope protein domain III | 0.07 | | 12.90 | 0.27 | 62-92 | X-ray | 1.67 | monomer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s93.3 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s93.3 GRGDKQINHHWHKA---------------------
|
| 6s92.1.A | Genome polyprotein
Crystal structure of group A of Usutu virus envelope protein domain III | 0.06 | | 12.90 | 0.27 | 62-92 | X-ray | 1.93 | homo-dimer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s92.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s92.1 GRGDKQINHHWHKA---------------------
|
| 6s94.1.A | Genome polyprotein
Crystal structure of group D of Usutu virus envelope protein domain III | 0.06 | | 12.90 | 0.27 | 62-92 | X-ray | 1.79 | homo-dimer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s94.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s94.1 GRGDKQINHHWHKA---------------------
|
| 6s94.1.B | Genome polyprotein
Crystal structure of group D of Usutu virus envelope protein domain III | 0.07 | | 12.90 | 0.27 | 62-92 | X-ray | 1.79 | homo-dimer | | HHblits | 0.31 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 6s94.1 -------------------------------------------------------------NAKVLVEMEPPFGDSYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 6s94.1 GRGDKQINHHWHKA---------------------
|
| 5omz.1.A | Envelope Protein
Solution structure of domain III (DIII)of Zika virus Envelope protein | 0.05 | | 16.13 | 0.27 | 62-92 | NMR | 0.00 | monomer | | HHblits | 0.30 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 5omz.1 -------------------------------------------------------------NSKMMLELDPPFGDSYIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 5omz.1 GVGEKKITHHWHRS---------------------
|
| 2jqm.1.A | Envelope protein E
Yellow Fever Envelope Protein Domain III NMR Structure (S288-K398) | 0.06 | | 12.90 | 0.27 | 62-92 | NMR | 0.00 | monomer | | HHblits | 0.30 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2jqm.1 -------------------------------------------------------------DDEVLIEVNPPFGDSYIIV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2jqm.1 GTGDSRLTYQWHKE---------------------
|
| 2jv6.1.A | Envelope protein E
YF ED3 Protein NMR Structure | 0.06 | | 12.90 | 0.27 | 62-92 | NMR | 0.00 | monomer | | HHblits | 0.30 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 2jv6.1 -------------------------------------------------------------DDEVLIEVNPPFGDSYIIV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2jv6.1 GTGDSRLTYQWHKE---------------------
|
| 4ffz.1.A | Envelope protein E
Crystal Structure of DENV1-E111 fab fragment bound to DENV-1 DIII (Western Pacific-74 strain). | 0.06 | | 23.33 | 0.27 | 63-92 | X-ray | 3.80 | hetero-oligomer | | HHblits | 0.32 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 4ffz.1 --------------------------------------------------------------KPVNIEAEPPFGESYIVV
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 4ffz.1 GAGEKALKLSWFKK---------------------
|
| 3vtt.1.A | Envelope protein E
High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3) | 0.06 | | 19.35 | 0.27 | 62-92 | X-ray | 1.70 | monomer | | HHblits | 0.29 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3vtt.1 -------------------------------------------------------------EEPVNIEAEPPFGESNIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3vtt.1 GIGDKALKINWYRK---------------------
|
| 3vtt.2.A | Envelope protein E
High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3) | 0.07 | | 19.35 | 0.27 | 62-92 | X-ray | 1.70 | monomer | | HHblits | 0.29 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCR--FVTD 3vtt.2 -------------------------------------------------------------EEPVNIEAEPPFGESNIVI
target TPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3vtt.2 GIGDKALKINWYRK---------------------
|
| 3ie4.1.A | Gram-Negative Binding Protein 3
b-glucan binding domain of Drosophila GNBP3 defines a novel family of pattern recognition receptor | 0.04 | | 19.35 | 0.27 | 68-98 | X-ray | 1.45 | monomer | 4 x ZN | HHblits | 0.28 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 3ie4.1 -------------------------------------------------------------------DVFYPKGFEVSIP
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 3ie4.1 DEEGITLFAFHGKLNEEM---------------
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| 2vtx.1.A | NPM-A PROTEIN
ACTIVATION OF NUCLEOPLASMIN, AN OLIGOMERIC HISTONE CHAPERONE, CHALLENGES ITS STABILITY | 0.01 | | 36.84 | 0.17 | 66-84 | X-ray | 2.50 | homo-pentamer | | HHblits | 0.37 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2vtx.1 -----------------------------------------------------------------GIELDPPVTFRLKAG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2vtx.1 SGPL-----------------------------
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| 2vtx.1.D | NPM-A PROTEIN
ACTIVATION OF NUCLEOPLASMIN, AN OLIGOMERIC HISTONE CHAPERONE, CHALLENGES ITS STABILITY | 0.02 | | 36.84 | 0.17 | 66-84 | X-ray | 2.50 | homo-pentamer | | HHblits | 0.37 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 2vtx.1 -----------------------------------------------------------------GIELDPPVTFRLKAG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 2vtx.1 SGPL-----------------------------
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| 1k5j.1.A | Nucleoplasmin Core
The Crystal Structure of Nucleoplasmin-Core | 0.02 | | 36.84 | 0.17 | 66-84 | X-ray | 2.30 | homo-pentamer | | HHblits | 0.36 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1k5j.1 -----------------------------------------------------------------GIELTPPVTFRLKAG
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1k5j.1 SGPL-----------------------------
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| 1lto.1.A | alpha tryptase I
Human alpha1-tryptase | 0.05 | | 9.09 | 0.19 | 27-48 | X-ray | 2.20 | homo-tetramer | | HHblits | 0.22 |
target NNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTP 1lto.1 --------------------------SGGPLVCKVNGTWLQAGVVSWD--------------------------------
target KGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ 1lto.1 ---------------------------------
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