Uridylate-specific endoribonuclease | P0DTD1 PRO_0000449632
Created: Jan. 13, 2021 at 08:06
| Oligo-State | Ligands | GMQE | QMEAN | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Homo-hexamer (matching prediction) | 0.94 | 0.69 | |||||||||||||
6 x URIDINE-5'-MONOPHOSPHATE
| |||||||||||||||
| Global Quality Estimate | Local Quality Estimate | Comparison |
|---|---|---|
| Template | Seq Identity | Coverage | Description | |
|---|---|---|---|---|
| 6wlc.1.A | 100.00% | Uridylate-specific endoribonuclease Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with Uridine-5'-Monophosphate |
| Biounit Oligo State | Homo-hexamer |
| QSQE | 0.92 |
| Method | X-ray, 1.82 Å |
| Seq Similarity | 0.61 |
| Coverage | 1.00 |
| Range | 1-346 |
| Ligand | Added to Model | Description |
|---|---|---|
| ✓ | URIDINE-5'-MONOPHOSPHATE | |
| ✓ | URIDINE-5'-MONOPHOSPHATE | |
| ✓ | URIDINE-5'-MONOPHOSPHATE | |
| ✓ | URIDINE-5'-MONOPHOSPHATE | |
| ✓ | URIDINE-5'-MONOPHOSPHATE | |
| ✓ | URIDINE-5'-MONOPHOSPHATE | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | ACETATE ION | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | FORMIC ACID | |
| ✕ - Not in contact with model. | FORMIC ACID | |
| ✕ - Not biologically relevant. | FORMIC ACID | |
| ✕ - Not in contact with model. | FORMIC ACID | |
| ✕ - Not biologically relevant. | FORMIC ACID | |
| ✕ - Not in contact with model. | FORMIC ACID | |
| ✕ - Not biologically relevant. | SULFATE ION | |
| ✕ - Not biologically relevant. | SULFATE ION | |
| ✕ - Not biologically relevant. | SULFATE ION | |
| ✕ - Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPA… | |
| ✕ - Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPA… | |
| ✕ - Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPA… | |
| ✕ - Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPA… | |
| ✕ - Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPA… | |
| ✕ - Not biologically relevant. | 2-AMINO-2-HYDROXYMETHYL-PROPA… |
Model-Template Alignment
| Oligo-State | Ligands | GMQE | QMEAN |
|---|---|---|---|
| Homo-hexamer (matching prediction) | None | 0.94 | 0.53 |
| Global Quality Estimate | Local Quality Estimate | Comparison |
|---|---|---|
| Template | Seq Identity | Coverage | Description | |
|---|---|---|---|---|
| 6w01.1.A | 100.00% | Uridylate-specific endoribonuclease The 1.9 A Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with a Citrate |
| Biounit Oligo State | Homo-hexamer |
| QSQE | 0.92 |
| Method | X-ray, 1.90 Å |
| Seq Similarity | 0.61 |
| Coverage | 1.00 |
| Range | 1-345 |
| Ligand | Added to Model | Description |
|---|---|---|
| ✕ - Not biologically relevant. | CITRIC ACID | |
| ✕ - Not biologically relevant. | CITRIC ACID | |
| ✕ - Not biologically relevant. | CITRIC ACID | |
| ✕ - Not biologically relevant. | CITRIC ACID | |
| ✕ - Not biologically relevant. | CITRIC ACID | |
| ✕ - Not biologically relevant. | CITRIC ACID | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not in contact with model. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | 1,2-ETHANEDIOL | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER | |
| ✕ - Not biologically relevant. | DI(HYDROXYETHYL)ETHER |
Model-Template Alignment
| Oligo-State | Ligands | GMQE | QMEAN |
|---|---|---|---|
| Homo-hexamer (matching prediction) | None | 0.92 | 0.23 |
| Global Quality Estimate | Local Quality Estimate | Comparison |
|---|---|---|
| Template | Seq Identity | Coverage | Description | |
|---|---|---|---|---|
| 2h85.1.A | 88.12% | Putative orf1ab polyprotein Crystal Structure of Nsp 15 from SARS |
| Biounit Oligo State | Homo-hexamer |
| QSQE | 0.85 |
| Method | X-ray, 2.60 Å |
| Seq Similarity | 0.58 |
| Coverage | 1.00 |
| Range | 1-345 |
Model-Template Alignment
| Oligo-State | Ligands | GMQE | QMEAN |
|---|---|---|---|
| Homo-hexamer (matching prediction) | None | 0.91 | -0.15 |
| Global Quality Estimate | Local Quality Estimate | Comparison |
|---|---|---|
| Template | Seq Identity | Coverage | Description | |
|---|---|---|---|---|
| 2rhb.1.A | 88.44% | Uridylate-specific endoribonuclease Crystal structure of Nsp15-H234A mutant- Hexamer in asymmetric unit |
| Biounit Oligo State | Homo-hexamer |
| QSQE | 0.86 |
| Method | X-ray, 2.80 Å |
| Seq Similarity | 0.58 |
| Coverage | 1.00 |
| Range | 1-344 |
Model-Template Alignment
Click model image to view in 3D
Click model image to view in 3D
Delete Model - ""
Are you sure you want to delete this model?
(This really can't be undone!)
Delete Project - ""
Are you sure you want to delete this project?
(This really can't be undone!)