Spike glycoprotein / ACE2_HUMAN hetero-oligomeric complex | P0DTC2, Q9BYF1
Created: Jan. 12, 2022 at 11:29
| Oligo-State | Ligands | GMQE | QMEANDisCo Global | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Hetero-3-2-mer | 0.74 | 0.78 ± 0.05 | |||||||||
4 x 2-acetamido-2-deoxy-beta-D-glucopyranose
| |||||||||||
| QMEANDisCo Local | QMEAN Z-Scores | |
|---|---|---|
| Template | Seq Identity | Coverage | Description | |
|---|---|---|---|---|
| 7mjm.1 | 99.45% | Processed angiotensin-converting enzyme 2, Spike glycoprotein |
| Biounit Oligo State | Hetero-pentamer |
| QSQE | - |
| Method | EM |
| Overall Seq Identity | 99.45% |
| Overall Seq Similarity | 0.62 |
| Target | Seq Identity | Seq Similarity | Range | Coverage |
|---|---|---|---|---|
| Processed angiotensin-converting enzyme 2 | 100.00% | 0.63 | DE: 19-614 | 0.74 |
| Spike glycoprotein | 99.17% | 0.61 | ABC: 14-1147 | 0.95 |
| Ligand | Added to Model | Description |
|---|---|---|
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… |
Model-Template Alignment
| Oligo-State | Ligands | GMQE | QMEANDisCo Global | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Hetero-3-1-mer | 0.72 | 0.73 ± 0.05 | |||||||||||||||||||||||||||||
9 x 2-acetamido-2-deoxy-beta-D-glucopyranose
5 x 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
| |||||||||||||||||||||||||||||||
| QMEANDisCo Local | QMEAN Z-Scores | |
|---|---|---|
| Template | Seq Identity | Coverage | Description | |
|---|---|---|---|---|
| 7kj2.1 | 99.67% | Angiotensin-converting enzyme 2, Spike glycoprotein |
| Biounit Oligo State | Hetero-tetramer |
| QSQE | - |
| Method | EM |
| Overall Seq Identity | 99.67% |
| Overall Seq Similarity | 0.62 |
| Target | Seq Identity | Seq Similarity | Range | Coverage |
|---|---|---|---|---|
| Angiotensin-converting enzyme 2 | 100.00% | 0.63 | D: 21-613 | 0.75 |
| Spike glycoprotein | 99.50% | 0.61 | BAC: 27-1147 | 0.94 |
| Ligand | Added to Model | Description |
|---|---|---|
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✓ | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Clashing with protein. | 2-acetamido-2-deoxy-beta-D-gl… | |
| ✕ - Not in contact with model. | 2-acetamido-2-deoxy-beta-D-gl… |
Model-Template Alignment
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