A7A237 | SWISS-MODEL Repository

A7A237 (SPB4_YEAS7) Saccharomyces cerevisiae (strain YJM789) (Baker's yeast)

ATP-dependent rRNA helicase SPB4 UniProtKB InterPro Interactive Modelling

606 aa; Sequence (Fasta) ; 2 identical sequences: Saccharomyces cerevisiae: P25808, A0A8H8UL81

It is possible new templates exist for this target since these models were created.

Available Structures

4 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model	7nad SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P04456; P05740; P05749; P0C2H6; P0C2H8; P0CX41; P0CX82; P14120; P14126; P17076; P25582; P25808; P39744; P40693; P49166; P49167; P53261; P87262; Q02892; Q04031; Q04660; Q07896; Q07915; Q12024;	4-560	1×ZN;
Assess
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model	7r7a SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;	4-560	2×ZN;
Assess
State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 local model	7r72 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P04456; P05740; P05749; P0C2H6; P0C2H8; P0CX82; P14120; P14126; P17076; P25582; P25808; P39744; P40693; P49166; P49167; P53261; P87262; Q02892; Q04660; Q07896; Q07915; Q12024;	4-560	1×ZN;
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model	7nac SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04031; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;	4-560	2×ZN; 1×SAH;
Assess

4 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7nac.1.v	monomer	0.90	4-560		99.83
Assess
7ohv.1.G	monomer	0.61	13-470		32.18
Assess
4ljy.1.A	monomer	0.60	6-417	1×MG;	31.00
Assess
8i9x.1.0	monomer	0.59	15-473		29.55
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments