C4QZQ7 (C4QZQ7_KOMPG) Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris)

DNA-directed RNA polymerase subunit beta UniProtKBInterProSTRINGInteractive Modelling

1227 aa; Sequence (Fasta) Identical sequences: Komagataella phaffii: F2QTX9

Sequence Features

 1163Zinc
 1166Zinc
 1182Zinc
 1185Zinc
 29-448RNA polymerase, beta subunit, protrusion
IPR007644PF04563
 211-400RNA polymerase Rpb2, domain 2
IPR007642PF04561
 474-536RNA polymerase Rpb2, domain 3
IPR007645PF04565
 573-634RNA polymerase Rpb2, domain 4
IPR007646PF04566
 678-745RNA polymerase Rpb2, domain 5
IPR007647PF04567
 753-1124DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR007120PF00562
 1126-1218RNA polymerase Rpb2, domain 7
IPR007641PF04560

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 Heteromer
A0A1B2JER8; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; F2QUC3;
APC;ZN;MG;5xog9-1222
'RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of th... Heteromer
C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6j509-1222
RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5o9-1222
RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5p9-1222
'RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA (+1 ... Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6inq9-1222
RNA polymerase II elongation complex stalled at SHL(-2) of the nucleosome Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5r9-1222
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5t9-1222
'RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, til... Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5u9-1222
'RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucle... Heteromer
C4QZ45; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; F2QTN1; P04908; P06899; P62805; P84243;
10×ZN;MG;6j4w9-1222
'RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucle... Heteromer
C4QZ45; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6j4x9-1222
'RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucle... Heteromer
C4QZ45; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6j4y9-1222
'RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of th... Heteromer
C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6j4z9-1222
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the... Heteromer
C4QZ45; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6j519-1222
'RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucle... Heteromer
C4QZ45; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6ir99-1222
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA Heteromer
C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5l9-1222
RNA Polymerase II elongation complex bound with Spt4/5 and TFIIS Heteromer
C4QWA8; C4QY79; C4R009; C4R0E6; C4R1V1; C4R273; C4R2R6; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1;
10×ZN;MG;5xon9-1222
RNA Polymerase II from Komagataella Pastoris (Type-3 crystal) Heteromer
C4QWA8; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QPE6;
ZN;5x5112-1224
RNA Polymerase II from Komagataella Pastoris (Type-1 crystal) Heteromer
C4QWA8; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QPE6;
ZN;5x4z12-1224
RNA Polymerase II from Komagataella Pastoris (Type-2 crystal) Heteromer
C4QWA8; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QPE6;
ZN;5x5013-1224