H2P2N7 (H2P2N7_PONAB) Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)

Pre-mRNA-processing factor 6 UniProtKBInterProInteractive Modelling

941 aa; Sequence (Fasta) ; 5 identical sequences: Homo sapiens: O94906; Pan troglodytes: K7BSZ8, A0A6D2VZZ2; Pan paniscus: A0A2R8ZAV4; Gorilla gorilla gorilla: G3RL41

Available Structures

27 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex)
5o9z
 Heteromer
O43172; O43290; O43395; O43447; O75533; O75554; O75643; O94906; O95777; P08579; P09661; P14678; P55081; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q13123; Q15029; Q15393; Q2TAY7; Q6P2Q9; Q7RTV0; Q8NAV1; Q8WWY3; Q96DI7; Q96NC0; Q9BWJ5; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0; 		6-941
100.0
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Structure Assessment
Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex
8r09
 Heteromer
O43172; O43290; O43395; O43447; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		8-941
100.0
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Structure Assessment
Cryo-EM structure of the cross-exon pre-B+ATP complex
8r0b
 Heteromer
O43172; O43290; O43395; O43447; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		8-941
100.0
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Structure Assessment
Cryo-EM Structure of Pre-B-like Complex (core part)
8qpe
 Heteromer
O43172; O43290; O43395; O75554; O94906; P55081; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8NAV1; Q8WWY3; Q96NC0; 		8-941
100.01×IHP;
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Structure Assessment
Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex
8rm5
 Heteromer
O43172; O43290; O43395; O43447; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		8-941
100.0
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Structure Assessment
Cryo-EM Structure of Pre-B+5'ssLNG Complex (core part)
8qpa
 Heteromer
O43172; O43290; O43395; O75643; O94906; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3; Q9BUQ8; 		8-941
100.01×IHP;
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Structure Assessment
Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part)
8qoz
 Heteromer
O43172; O43290; O43395; O75643; O94906; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3; Q9BUQ8; 		8-941
100.01×IHP;
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Structure Assessment
cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)
8q7n
 Heteromer
O14776; O43172; O43290; O43395; O75554; O94906; P41223; P55081; P55769; P83876; Q15029; Q15459; Q6P2Q9; Q8NAV1; Q8WWY3; Q96NC0; Q9BZL1; 		8-941
100.0
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Structure Assessment
Cryo-EM Structure of Pre-B+ATP Complex (core part)
8qpb
 Heteromer
O43172; O43290; O43395; O75643; O94906; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3; Q9BUQ8; 		8-941
100.01×IHP;
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Structure Assessment
Cryo-EM structure of human exon-defined spliceosome in the early B state.
8h6l
 Heteromer
O43172; O43290; O43395; O43447; O75533; O75554; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q2TAY7; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		6-937
100.01×IHP; 1×GTP; 1×MG; 1×ZN;
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Structure Assessment
Cryo-EM structure of the cross-exon pre-B+5'ss complex
8r0a
 Heteromer
O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		8-937
100.0
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Structure Assessment
Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.
8h6e
 Heteromer
O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		18-937
100.01×IHP; 1×MG; 1×GTP; 1×ZN;
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Structure Assessment
Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution.
6qw6
 Heteromer
O43172; O43290; O43395; O75643; O94906; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0; 		18-937
100.01×IHP; 1×MG; 1×GTP; 1×ZN;
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Structure Assessment
Cryo-EM structure of the cross-exon pre-B complex
8qxd
 Heteromer
O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		18-937
100.0
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Structure Assessment
Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.
8h6j
 Heteromer
O43172; O43290; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		18-937
100.01×IHP; 1×MG; 1×GTP; 1×ZN;
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Structure Assessment
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP…
8y6o
 Heteromer
O43172; O43290; O43395; O75643; O94906; P14678; P55769; P62304; P62306; P62308; P62314; P62316; P62318; Q13523; Q15029; Q16560; Q53GS9; Q6IEG0; Q6P2Q9; Q86UT8; Q8N8D1; Q8WWY3; Q96DI7; Q9BUQ8; Q9BV90; Q9NX01; Q9UDW3; 		18-937
100.02×MG; 1×IHP; 1×GTP; 6×ZN;
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Structure Assessment
The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)
6ah0
 Heteromer
O43172; O43395; O75533; O75643; O94906; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0; 		6-919
100.01×IHP; 1×GTP; 1×MG;
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Structure Assessment
3D structure determination of the human*U4/U6.U5* tri-snRNP complex
3jcr
 Heteromer
O43172; O43395; O75643; O94906; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WWY3; Q96DI7; Q9BUQ8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0; 		292-937
100.0
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Structure Assessment
Cryo-EM Structure of Pre-B Complex (core part)
8qp8
 Heteromer
O43290; O43395; O94906; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8; Q9BUQ8; 		18-282
100.01×IHP;
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Structure Assessment
Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)
8qp9
 Heteromer
O43290; O43395; O75643; O94906; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8; Q9BUQ8; 		18-282
100.01×IHP;
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Structure Assessment
Cryo-EM Structure of Pre-B+5'ss Complex (core part)
8qpk
 Heteromer
O43290; O75643; O94906; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8; Q9BUQ8; 		8-269
100.01×IHP;
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Structure Assessment
Structure of the human 20S U5 snRNP core
8q91
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q9BUQ8; 		95-163
100.01×GTP;
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Structure Assessment
Structure of the human 20S U5 snRNP
8rc0
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8; 		95-163
100.01×GTP;
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Structure Assessment
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1)
8q7v
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9Y5U2; 		99-121
1001×MG; 1×GTP;
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Structure Assessment
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)
8q7x
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8; 		99-121
1001×MG; 1×GTP;
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Structure Assessment
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3)
8q7w
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8; 		99-121
1001×MG; 1×GTP;
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Structure Assessment
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2)
8q7q
 Heteromer
O75643; O94906; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9Y5U2; 		99-121
1001×MG; 1×GTP;
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Structure Assessment

8 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8h6e.1.1monomer0.6918-937
100.00
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Model report
Structure Assessment
8qo9.55.Amonomer0.628-941
100.00
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Model report
Structure Assessment
5o9z.1.Gmonomer0.616-941
100.00
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Model report
Structure Assessment
9fmd.16.Amonomer0.58289-835
15.96
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Model report
Structure Assessment
9fmd.17.Amonomer0.57284-836
17.98
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Model report
Structure Assessment
9fmd.16.Amonomer0.54327-914
16.84
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Model report
Structure Assessment
9fmd.16.Amonomer0.54296-902
18.35
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Model report
Structure Assessment
9fmd.17.Amonomer0.53292-900
20.70
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Model report
Structure Assessment