SMTL ID : 8r09.1

Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-3-1-3-3-3-3-3-3-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
None
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH
Citation
Zhang, Z. et al., Structural insights into the cross-exon to cross-intron spliceosome switch. Nature (2024)
Release Date
2024-05-22
Peptides
U6 snRNA-associated Sm-like protein LSm6: A
U6 snRNA-associated Sm-like protein LSm7: B
U6 snRNA-associated Sm-like protein LSm2: C
U6 snRNA-associated Sm-like protein LSm3: D
U6 snRNA-associated Sm-like protein LSm8: E
U6 snRNA-associated Sm-like protein LSm4: F
U6 snRNA-associated Sm-like protein LSm5: G
U5 small nuclear ribonucleoprotein 40 kDa protein: H
Splicing factor 3B subunit 4: I
Splicing factor 3A subunit 2: K
Splicing factor 3A subunit 3: L
Splicing factor 3B subunit 2: M
Splicing factor 3B subunit 5: N
Splicing factor 3B subunit 3: P
PHD finger-like domain-containing protein 5A: Q
Splicing factor 3B subunit 1: R
Splicing factor 3B subunit 6: S
Small nuclear ribonucleoprotein Sm D2: T4v
U2 small nuclear ribonucleoprotein B'': U
Small nuclear ribonucleoprotein F: V5s
Small nuclear ribonucleoprotein-associated proteins B and B': W7u
Small nuclear ribonucleoprotein Sm D3: X6r
Small nuclear ribonucleoprotein G: Y8w
Small nuclear ribonucleoprotein E: Z3x
Small nuclear ribonucleoprotein Sm D1: 02t
U2 small nuclear ribonucleoprotein A': 1
U5 small nuclear ribonucleoprotein 200 kDa helicase: 9
Peptidyl-prolyl cis-trans isomerase H: a
Probable ATP-dependent RNA helicase DDX23: b
U4/U6 small nuclear ribonucleoprotein Prp3: c
U4/U6 small nuclear ribonucleoprotein Prp31: d
U4/U6 small nuclear ribonucleoprotein Prp4: e
Pre-mRNA-processing factor 6: f
Pre-mRNA-processing-splicing factor 8: g
Ubiquitin carboxyl-terminal hydrolase 39: h
U4/U6.U5 tri-snRNP-associated protein 1: i
116 kDa U5 small nuclear ribonucleoprotein component: j
NHP2-like protein 1, N-terminally processed: k
Thioredoxin-like protein 4A: l
Splicing factor 3A subunit 1: o
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
66
B
67
C
62
D
63
E
68
F
64
G
65
H
E
I
B4
K
8
L
9
M
B2
N
B5
P
B3
Q
BP
R
B1
S
B6
T
22
4
42
v
52
U
2B
V
2f
5
4f
s
5f
W
2b
7
4b
u
5b
X
23
6
43
r
53
Y
2g
8
4g
w
5g
Z
2e
3
4e
x
5e
0
21
2
41
t
51
1
2A
9
B
a
W
b
G
c
J
d
L
e
F
f
N
g
A
h
U
i
S
j
C
k
M
l
D
o
7

U6 snRNA-associated Sm-like protein LSm6

U6 snRNA-associated Sm-like protein LSm7

U6 snRNA-associated Sm-like protein LSm2

U6 snRNA-associated Sm-like protein LSm3

U6 snRNA-associated Sm-like protein LSm8

U6 snRNA-associated Sm-like protein LSm4

U6 snRNA-associated Sm-like protein LSm5

U5 small nuclear ribonucleoprotein 40 kDa protein

Splicing factor 3B subunit 4

Splicing factor 3A subunit 2

Splicing factor 3A subunit 3

Splicing factor 3B subunit 2

Splicing factor 3B subunit 5

Splicing factor 3B subunit 3

PHD finger-like domain-containing protein 5A

Splicing factor 3B subunit 1

Splicing factor 3B subunit 6

Small nuclear ribonucleoprotein Sm D2

U2 small nuclear ribonucleoprotein B''

Small nuclear ribonucleoprotein F

Toggle Identical (V5)

Small nuclear ribonucleoprotein-associated proteins B and B'

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein G

Toggle Identical (8w)

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein Sm D1

Toggle Identical (2t)

U2 small nuclear ribonucleoprotein A'

U5 small nuclear ribonucleoprotein 200 kDa helicase

Peptidyl-prolyl cis-trans isomerase H

Probable ATP-dependent RNA helicase DDX23

U4/U6 small nuclear ribonucleoprotein Prp3

U4/U6 small nuclear ribonucleoprotein Prp31

U4/U6 small nuclear ribonucleoprotein Prp4

Pre-mRNA-processing factor 6

Pre-mRNA-processing-splicing factor 8

Ubiquitin carboxyl-terminal hydrolase 39

U4/U6.U5 tri-snRNP-associated protein 1

116 kDa U5 small nuclear ribonucleoprotein component

NHP2-like protein 1, N-terminally processed

Thioredoxin-like protein 4A

Splicing factor 3A subunit 1

Related Entries With Identical Sequence

1b34.1 | 1e7k.1 | 1e7k.2 | 1mzw.1 | 1qgv.1 | 1qoi.1 | 1syx.1 | 1syx.2 | 1syx.3 | 2f9d.1 | 2f9d.2 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12 | 4v98.13  more...