O94906 | SWISS-MODEL Repository

O94906 (PRP6_HUMAN) Homo sapiens (Human)

Pre-mRNA-processing factor 6 UniProtKB InterPro STRING Interactive Modelling

941 aa; Sequence (Fasta) ; (Isoform 2); 5 identical sequences: Pongo abelii: H2P2N7; Pan troglodytes: K7BSZ8, A0A6D2VZZ2; Pan paniscus: A0A2R8ZAV4; Gorilla gorilla gorilla: G3RL41

It is possible new templates exist for this target since these models were created.

Available Structures

27 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex)	5o9z PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75554; O75643; O95777; P08579; P09661; P14678; P55081; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q13123; Q15029; Q15393; Q2TAY7; Q6P2Q9; Q7RTV0; Q8NAV1; Q8WWY3; Q96DI7; Q96NC0; Q9BWJ5; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0;	6-941	100.0
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Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex	8r09 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	8-941	100.0
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Cryo-EM structure of the cross-exon pre-B+ATP complex	8r0b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	8-941	100.0
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Cryo-EM Structure of Pre-B-like Complex (core part)	8qpe PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75554; P55081; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8NAV1; Q8WWY3; Q96NC0;	8-941	100.0	1×IHP;
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Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex	8rm5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	8-941	100.0
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Cryo-EM Structure of Pre-B+5'ssLNG Complex (core part)	8qpa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3; Q9BUQ8;	8-941	100.0	1×IHP;
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Cryo-EM Structure of Pre-B+5'ss+ATPgammaS Complex (core part)	8qoz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3; Q9BUQ8;	8-941	100.0	1×IHP;
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cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region)	8q7n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14776; O43172; O43290; O43395; O75554; P41223; P55081; P55769; P83876; Q15029; Q15459; Q6P2Q9; Q8NAV1; Q8WWY3; Q96NC0; Q9BZL1;	8-941	100.0
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Cryo-EM Structure of Pre-B+ATP Complex (core part)	8qpb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; P55769; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WWY3; Q9BUQ8;	8-941	100.0	1×IHP;
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Cryo-EM structure of human exon-defined spliceosome in the early B state.	8h6l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O43447; O75533; O75554; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q2TAY7; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	6-937	100.0	1×IHP; 1×GTP; 1×MG; 1×ZN;
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Cryo-EM structure of the cross-exon pre-B+5'ss complex	8r0a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	8-937	100.0
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Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.	8h6e PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	18-937	100.0	1×IHP; 1×MG; 1×GTP; 1×ZN;
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Structure of the human U5.U4/U6 tri-snRNP at 2.9A resolution.	6qw6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0;	18-937	100.0	1×IHP; 1×MG; 1×GTP; 1×ZN;
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Cryo-EM structure of the cross-exon pre-B complex	8qxd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	18-937	100.0
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Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.	8h6j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q13523; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WVK2; Q8WWY3; Q96DI7; Q9BTD8; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	18-937	100.0	1×IHP; 1×MG; 1×GTP; 1×ZN;
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Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP…	8y6o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43290; O43395; O75643; P14678; P55769; P62304; P62306; P62308; P62314; P62316; P62318; Q13523; Q15029; Q16560; Q53GS9; Q6IEG0; Q6P2Q9; Q86UT8; Q8N8D1; Q8WWY3; Q96DI7; Q9BUQ8; Q9BV90; Q9NX01; Q9UDW3;	18-937	100.0	2×MG; 1×IHP; 1×GTP; 6×ZN;
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The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)	6ah0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43395; O75533; O75643; O95777; P08579; P09661; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q12874; Q13435; Q15029; Q15393; Q15427; Q15428; Q15459; Q53GS9; Q6P2Q9; Q7RTV0; Q8WWY3; Q96DI7; Q9BUQ8; Q9BWJ5; Q9UK45; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	6-919	100.0	1×IHP; 1×GTP; 1×MG;
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3D structure determination of the humanU4/U6.U5 tri-snRNP complex	3jcr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43172; O43395; O75643; O95777; P14678; P55769; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; P83876; Q15029; Q53GS9; Q6P2Q9; Q8WWY3; Q96DI7; Q9BUQ8; Q9UK45; Q9Y333; Q9Y4Y9; Q9Y4Z0;	292-937	100.0
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Cryo-EM Structure of Pre-B Complex (core part)	8qp8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43290; O43395; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8; Q9BUQ8;	18-282	100.0	1×IHP;
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Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)	8qp9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43290; O43395; O75643; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8; Q9BUQ8;	18-282	100.0	1×IHP;
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Cryo-EM Structure of Pre-B+5'ss Complex (core part)	8qpk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43290; O75643; P83876; Q15029; Q15459; Q53GS9; Q6P2Q9; Q8WVK2; Q8WWY3; Q9BTD8; Q9BUQ8;	8-269	100.0	1×IHP;
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Structure of the human 20S U5 snRNP core	8q91 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q9BUQ8;	95-163	100.0	1×GTP;
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Structure of the human 20S U5 snRNP	8rc0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8;	95-163	100.0	1×GTP;
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Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1)	8q7v PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9Y5U2;	99-121	100	1×MG; 1×GTP;
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Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)	8q7x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8;	99-121	100	1×MG; 1×GTP;
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Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3)	8q7w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9BUQ8;	99-121	100	1×MG; 1×GTP;
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Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2)	8q7q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75643; O95400; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q15029; Q6P2Q9; Q96DI7; Q9Y5U2;	99-121	100	1×MG; 1×GTP;
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9 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
6qw6.1.V	monomer	0.71	18-937	100.00
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8h6l.1.1	monomer	0.68	6-937	100.00
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8c6j.27.A	monomer	0.62	283-769	25.10
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6ahd.4.A	monomer	0.61	6-941	100.00
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5o9z.1.G	monomer	0.61	6-941	100.00
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9fmd.16.A	monomer	0.58	289-835	15.96
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8c6j.27.A	monomer	0.56	292-903	20.70
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9fmd.16.A	monomer	0.54	327-914	16.84
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8c6j.28.A	monomer	0.54	296-902	18.35
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

6 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	6qw6.1.V	monomer	0.70	18-897	100.00
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Isoform 2	8h6l.1.1	monomer	0.68	6-897	100.00
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Isoform 2	8chy.1.A	monomer	0.62	541-834	16.67
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Isoform 2	6sn5.1.D	monomer	0.61	665-866	15.34
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Isoform 2	6ahd.4.A	monomer	0.60	6-901	100.00
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Isoform 2	5o9z.1.G	monomer	0.59	6-901	100.00
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O94906 (PRP6_HUMAN) Homo sapiens (Human)

Pre-mRNA-processing factor 6 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

27 Experimental Structures

9 SWISS-MODEL models

6 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Pre-mRNA-processing factor 6 UniProtKB InterPro STRING Interactive Modelling