N1P8Q7 (N1P8Q7_YEASC) Saccharomyces cerevisiae (strain CENPK113-7D) (Baker's yeast)

Cdc40p UniProtKBInterProInteractive Modelling

455 aa; Sequence (Fasta) ; 5 identical sequences: Saccharomyces cerevisiae: P40968, A0A8H8UNR1, A6ZYW3, B3LFT8; Saccharomyces boulardii: A0A0L8VTS1

Available Structures

13 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
S. cerevisiae spliceosomal post-catalytic P complex
6bk8
 Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		50-455
5×MG; 1×IHP; 1×GTP; 7×ZN;
Assess
Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom
6j6g
 Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-455
1×IHP; 1×GTP; 6×MG; 6×ZN;
Assess
Post-catalytic P complex spliceosome with 3' splice site docked
6exn
 Heteromer
P24384; P25337; P28004; P28320; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		50-454
1×MG; 1×IHP; 1×GTP; 7×ZN;
Assess
Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom
6j6n
 Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-455
1×IHP; 1×GTP; 6×MG; 6×ZN;
Assess
Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution
5gmk
 Heteromer
P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-455
1×GTP; 6×MG; 7×ZN;
Assess
Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom
6j6q
 Heteromer
P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-455
1×IHP; 1×GTP; 6×MG; 7×ZN;
Assess
Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution
5wsg
 Heteromer
P15938; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-455
1×GTP; 6×MG; 6×ZN;
Assess
Structure of a spliceosome remodeled for exon ligation
5mq0
 Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-454
3×MG; 2×K; 1×IHP; 1×GTP; 6×ZN;
Assess
Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom
5ylz
 Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-454
1×IHP; 1×GTP; 6×MG; 6×ZN;
Assess
Structure of a spliceosome remodeled for exon ligation
5mps
 Heteromer
P25337; P28004; P33334; P33411; P36048; P38241; P40018; P40204; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06217; Q12046; Q12309; Q12330; Q12417; 		51-454
3×MG; 2×K; 1×IHP; 1×GTP; 6×ZN;
Assess
Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom
6j6h
 Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-73
1×IHP; 1×GTP; 6×MG; 6×ZN;
Assess
Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 a…
5y88
 Heteromer
P25337; P28004; P28320; P32523; P33334; P36048; P36118; P38241; P40018; P40204; P40567; P40968; P43321; P52868; P53131; P53277; P54999; Q02260; Q03654; Q03772; Q04048; Q06091; Q06217; Q06411; Q08963; Q12046; Q12309; Q12330; Q12417; 		51-73
1×IHP; 1×GTP; 6×MG; 6×ZN;
Assess
Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution
5gm6
 Heteromer
P0C074; P20095; P25337; P28004; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P40968; P43321; P46947; P49955; P53277; P53333; P53769; P54999; Q02260; Q02554; Q02770; Q03375; Q03654; Q03772; Q04048; Q04693; Q06091; Q06217; Q06835; Q07350; Q07930; Q12046; Q12309; Q12330; Q12417; Q99181; 		51-73
1×GTP; 5×MG; 13×ZN; 1×ADP;
Assess

5 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7b9v.1.emonomer0.6851-454
100.00
Assess
6bk8.1.Pmonomer0.6650-455
100.00
Assess
6icz.1.Wmonomer0.6478-454
38.24
Assess
6j6q.1.Nmonomer0.6251-455
100.00
Assess
5wsg.1.Umonomer0.6251-455
100.00
Assess