Q06217 (SMD2_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Small nuclear ribonucleoprotein Sm D2 UniProtKBInterProSTRINGInteractive Modelling

110 aa; Sequence (Fasta) ; 5 identical sequences: Saccharomyces cerevisiae: G2WJA1, C8ZDN9, A7A1F9, B3RHF7; Saccharomyces pastorianus: A0A6C1DYA7
Created with Raphaël 2.2.0102030405060708090100110MSSQIIDRPKHELSRAELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTPVEQ06217InterProSource: InterProSource: PDBhetero-oligomer 2-108Source: PDBhetero-oligomer 15-108

Available Structures

34 Experimental Structures

Description
PDB ID
Oligo-state
Range
Seq id (%)
Ligands
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
8w2o
 Heteromer
P32605; P39682; P40018; P40204; P43321; P53207; P54999; Q00539; Q00916; Q02260; Q03776; Q03782; Q05900; Q07508; Q12330; 		2-108
100
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Structure Assessment
S. cerevisiae spliceosomal E complex (UBC4)
6n7p
 Heteromer
P32605; P33203; P34160; P39682; P40018; P40204; P43321; P53207; P54999; Q00539; Q00916; Q02260; Q03776; Q03782; Q05900; Q07508; Q08920; Q12330; 		2-108
1003×ZN;
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Structure Assessment
Saccharomyces cerevisiae spliceosomal E complex (ACT1)
6n7r
 Heteromer
P32605; P39682; P40018; P40204; P43321; P53207; P54999; Q00539; Q00916; Q02260; Q03776; Q03782; Q05900; Q07508; Q12330; 		2-108
1001×ZN;
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Structure Assessment
Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
7oqe
 Heteromer
P0C074; P19736; P21372; P32524; P32605; P33203; P39682; P40018; P40204; P40567; P43321; P49955; P53207; P54999; Q00539; Q00916; Q02260; Q02554; Q03776; Q03782; Q04693; Q05900; Q06835; Q07350; Q07508; Q08963; Q12330; Q99181; 		8-108
100.0
Download
Structure Assessment
Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom
6j6g
 Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		8-108
1001×IHP; 1×GTP; 6×MG; 6×ZN;
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Structure Assessment
Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom
6j6h
 Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		8-108
1001×IHP; 1×GTP; 6×MG; 6×ZN;
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Structure Assessment
Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom
6j6n
 Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		8-108
1001×IHP; 1×GTP; 6×MG; 6×ZN;
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Structure Assessment
Prespliceosome structure provides insight into spliceosome assembly and regulation (map A2)
6g90
 Heteromer
P0C074; P19736; P32524; P32605; P39682; P40018; P40204; P40567; P43321; P49955; P53207; P54999; Q00539; Q00916; Q02260; Q02554; Q03776; Q03782; Q04693; Q05900; Q06835; Q07350; Q07508; Q08963; Q12330; Q99181; 		8-108
100.09×ZN;
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Structure Assessment
The U1 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
7oqc
 Heteromer
P32605; P39682; P40018; P40204; P43321; P53207; P54999; Q00539; Q00916; Q02260; Q03776; Q03782; Q05900; Q07508; Q12330; 		8-108
100.0
Download
Structure Assessment
Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 …
5zwn
 Heteromer
P23394; P32605; P39682; P40018; P40204; P43321; P53207; P54999; Q00539; Q00916; Q02260; Q03776; Q03782; Q05900; Q07508; Q12330; 		8-108
1003×ZN;
Download
Structure Assessment
Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom
6j6q
 Heteromer
P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		8-108
1001×IHP; 1×GTP; 6×MG; 7×ZN;
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Structure Assessment
Yeast C complex spliceosome at 2.8 Angstrom resolution with Prp18/Slu7 bound
7b9v
 Heteromer
P32639; P33334; P40018; P40204; P43321; P54999; Q02260; Q12330; 		12-108
1006×MG; 1×K; 1×KGN; 1×GTP; 8×ZN;
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Structure Assessment
S. cerevisiae U1 snRNP
6n7x
 Heteromer
P32605; P39682; P40018; P40204; P43321; P53207; P54999; Q00539; Q00916; Q02260; Q03776; Q03782; Q05900; Q12330; 		13-108
100
Download
Structure Assessment
Structure of a spliceosome remodeled for exon ligation
5mq0
 Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1003×MG; 2×K; 1×IHP; 1×GTP; 6×ZN;
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Structure Assessment
Post-catalytic P complex spliceosome with 3' splice site docked
6exn
 Heteromer
P24384; P25337; P28004; P28320; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1001×MG; 1×IHP; 1×GTP; 7×ZN;
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Structure Assessment
yeast activated spliceosome
5lqw
 Heteromer
P0C074; P20095; P25337; P28004; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P43321; P46947; P49955; P53333; P54999; Q02260; Q03654; Q04048; Q04693; Q06835; Q07930; Q12046; Q12309; Q12330; Q12417; 		15-108
100
Download
Structure Assessment
S. cerevisiae spliceosomal post-catalytic P complex
6bk8
 Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1005×MG; 1×IHP; 1×GTP; 7×ZN;
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Structure Assessment
Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution
5gmk
 Heteromer
P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1001×GTP; 6×MG; 7×ZN;
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Structure Assessment
Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRN…
5zwm
 Heteromer
P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40089; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q02260; Q02554; Q03338; Q04693; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12420; Q99181; 		17-110
100.01×GTP; 1×MG; 6×ZN;
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Structure Assessment
Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 a…
5y88
 Heteromer
P25337; P28004; P28320; P32523; P33334; P36048; P36118; P38241; P40018; P40204; P40567; P40968; P43321; P52868; P53131; P53277; P54999; Q02260; Q03654; Q03772; Q04048; Q06091; Q06411; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1001×IHP; 1×GTP; 6×MG; 6×ZN;
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Structure Assessment
Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution
5gm6
 Heteromer
P0C074; P20095; P25337; P28004; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P40968; P43321; P46947; P49955; P53277; P53333; P53769; P54999; Q02260; Q02554; Q02770; Q03375; Q03654; Q03772; Q04048; Q04693; Q06091; Q06835; Q07350; Q07930; Q12046; Q12309; Q12330; Q12417; Q99181; 		15-108
1001×GTP; 5×MG; 13×ZN; 1×ADP;
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Structure Assessment
Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom
5ylz
 Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1001×IHP; 1×GTP; 6×MG; 6×ZN;
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Structure Assessment
Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNP
5gam
 Heteromer
P33334; P36048; P40018; P40204; P43321; P54999; Q02260; Q12330; 		15-108
1001×GTP;
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Structure Assessment
The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom
5gan
 Heteromer
P19735; P20053; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40089; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06406; Q06819; Q12330; Q12420; 		15-108
1001×GTP;
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Structure Assessment
Structure of the core of the yeast spliceosome immediately after branching
5lj3
 Heteromer
P21374; P25337; P28004; P28320; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1002×MG; 7×ZN; 1×GTP;
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Structure Assessment
Structure of a spliceosome remodeled for exon ligation
5mps
 Heteromer
P25337; P28004; P33334; P33411; P36048; P38241; P40018; P40204; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q12046; Q12309; Q12330; Q12417; 		15-108
1003×MG; 2×K; 1×IHP; 1×GTP; 6×ZN;
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Structure Assessment
Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom
5zwo
 Heteromer
P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P38282; P39990; P40018; P40070; P40089; P40204; P40565; P40567; P43321; P46947; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06406; Q06819; Q06835; Q07350; Q07930; Q08963; Q12330; Q12368; Q12420; Q99181; 		17-110
100.01×GTP; 1×MG;
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Structure Assessment
Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution
5wsg
 Heteromer
P15938; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1001×GTP; 6×MG; 6×ZN;
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Structure Assessment
Head region of the yeast spliceosomal U4/U6.U5 tri-snRNP
5gao
 Heteromer
P32639; P33334; P40018; P40204; P43321; P54999; Q02260; Q12330; Q12420; 		15-108
100
Download
Structure Assessment
Overall structure of the yeast spliceosome immediately after branching.
5lj5
 Heteromer
P15938; P21374; P25337; P28004; P28320; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		15-108
1002×MG; 7×ZN; 1×GTP;
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Structure Assessment
Structure of a pre-catalytic spliceosome
5nrl
 Heteromer
A6ZYX7; P0C074; P19735; P19736; P20053; P32524; P32639; P33334; P36048; P38203; P38282; P39990; P40018; P40070; P40089; P40204; P40567; P43321; P47093; P49704; P49955; P53905; P54999; P57743; Q00723; Q02260; Q02554; Q03338; Q04693; Q06819; Q06835; Q07350; Q08963; Q12330; Q12368; Q12420; Q99181; 		17-108
1001×GTP; 7×ZN;
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Structure Assessment
The U2 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
7oqb
 Heteromer
P0C074; P19736; P21372; P32524; P40018; P40204; P40567; P43321; P49955; P54999; Q02260; Q02554; Q04693; Q06835; Q07350; Q08963; Q12330; Q99181; 		17-108
100
Download
Structure Assessment
Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP
3jcm
 Heteromer
P19735; P20053; P32639; P33334; P36048; P38203; P39990; P40018; P40070; P40089; P40204; P43321; P47093; P49704; P53905; P54999; P57743; Q02260; Q03338; Q06406; Q06819; Q12330; 		20-110
100.01×GTP; 1×M7M;
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Structure Assessment
Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution
9dtr
 Heteromer
P21374; P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P38302; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53913; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q08963; Q12046; Q12309; Q12330; Q12417; 		18-108
1002×MG; 4×K; 2×IHP; 1×GTP; 7×ZN;
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Structure Assessment

1 SWISS-MODEL model

Template
Oligo-state
QMEANDisCo
Range
Ligands
Trg-Tpl Seq id (%)
7oqc.1.Omonomer0.798-108
100.00
Download
Model report
Structure Assessment

Alignments

Small nuclear ribonucleoprotein Sm D2 Q06217 UniProtKBInterPro

Q06217
5y88.3
5y88.c
RAELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTP108
RAELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTP108
-----------------------------VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTP108
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor 8 P33334 UniProtKBInterPro

P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
P33334
5y88.A
LYTPKAEMPPEHLRKIINTHSDMASKMYNTDKKAFLGALKYLPHAILKLLENMPHPWEQAKEVKVLYHTSGAITFVNETPRVIEPVYTAQWSATWIAMRREKRDRTHFKRMRFPPFDDDEPPLSYEQHIENIEPLDPINLPLDSQDDEYVKDWLYDSRPL286
LYTPKAEMPPEHLRKIINTHSDMASKMYNTDKKAFLGALKYLPHAILKLLENMPHPWEQAKEVKVLYHTSGAITFVNETPRVIEPVYTAQWSATWIAMRREKRDRTHFKRMRFPPFDDDEPPLSYEQHIENIEPLDPINLPLDSQDDEYVKDWLYDSRPL286
EEDSKKVNGTSYKKWSFDLPEMSNLYRLSTPLRDEVTDKNYYYLFDKKSFFNGKALNNAIPGGPKFEPLYPREEEEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPRSVRIPWYNNPVSCIIQNDEEYDTPALFFDPSLNPIPHFIDNNSSLNVSNT446
EEDSKKVNGTSYKKWSFDLPEMSNLYRLSTPLRDEVTDKNYYYLFDKKSFFNGKALNNAIPGGPKFEPLYPREEEEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPRSVRIPWYNNPVSCIIQNDEEYDTPALFFDPSLNPI---------------431
KENGDFTLPEDFAPLLAEEEELILPNTKDAMSLYHSPFPFNRTKGKMVRAQDVALAKKWFLQHPDEEYPVKVKVSYQKLLKNYVLNELHPTLPTNHNKTKLLKSLKNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIHRKGLTYLHLDYNFNLKPTKTLT606
---GDFTLPEDFAPLLAEEEELILPNTKDAMSLYHSPFPFNRTKGKMVRAQDVALAKKWFLQHPDEEYPVKVKVSYQKLLKNYVLNELHPTLPTNHNKTKLLKSLKNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIHRKGLTYLHLDYNFNLKPTKTLT606
TKERKKSRLGNSFHLMRELLKMMKLIVDTHVQFRLGNVDAFQLADGIHYILNHIGQLTGIYRYKYKVMHQIRACKDLKHIIYYKFNKNLGKGPGCGFWQPAWRVWLNFLRGTIPLLERYIGNLITRQFEGRSNEIVKTTTKQRLDAYYDLELRNSVMDDI766
TKERKKSRLGNSFHLMRELLKMMKLIVDTHVQFRLGNVDAFQLADGIHYILNHIGQLTGIYRYKYKVMHQIRACKDLKHIIYYKFNKNLGKGPGCGFWQPAWRVWLNFLRGTIPLLERYIGNLITRQFEGRSNEIVKTTTKQRLDAYYDLELRNSVMDDI766
LEMMPESIRQKKARTILQHLSEAWRCWKANIPWDVPGMPAPIKKIIERYIKSKADAWVSAAHYNRERIKRGAHVEKTMVKKNLGRLTRLWIKNEQERQRQIQKNGPEITPEEATTIFSVMVEWLESRSFSPIPFPPLTYKNDTKILVLALEDLKDVYASK926
LEMMPESIRQKKARTILQHLSEAWRCWKANIPWDVPGMPAPIKKIIERYIKSKADAWVSAAHYNRERIKRGAHVEKTMVKKNLGRLTRLWIKNEQERQRQIQKNGPEITPEEATTIFSVMVEWLESRSFSPIPFPPLTYKNDTKILVLALEDLKDVYASK926
VRLNASEREELALIEEAYDNPHDTLNRIKKYLLTQRVFKPVDITMMENYQNISPVYSVDPLEKITDAYLDQYLWYEADQRKLFPNWIKPSDSEIPPLLVYKWTQGINNLSEIWDVSRGQSAVLLETTLGEMAEKIDFTLLNRLLRLIVDPNIADYITAKN1086
VRLNASEREELALIEEAYDNPHDTLNRIKKYLLTQRVFKPVDITMMENYQNISPVYSVDPLEKITDAYLDQYLWYEADQRKLFPNWIKPSDSEIPPLLVYKWTQGINNLSEIWDVSRGQSAVLLETTLGEMAEKIDFTLLNRLLRLIVDPNIADYITAKN1086
NVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANNPNEFMQFKSKEVEKAHPIRLYTRYLDRIYMLFHFEEDEGEELTDEYLAENPDPNFENSIGYNNRKCWPKDSRMRLIRQDVNLGRAVFWEIQSRVPTSLTSIKWENA1246
NVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANNPNEFMQFKSKEVEKAHPIRLYTRYLDRIYMLFHFEEDEGEELTDEYLAENPDPNFENSIGYNNRKCWPKDSRMRLIRQDVNLGRAVFWEIQSRVPTSLTSIKWENA1246
FVSVYSKNNPNLLFSMCGFEVRILPRQRMEEVVSNDEGVWDLVDERTKQRTAKAYLKVSEEEIKKFDSRIRGILMASGSTTFTKVAAKWNTSLISLFTYFREAIVATEPLLDILVKGETRIQNRVKLGLNSKMPTRFPPAVFYTPKELGGLGMISASHIL1406
FVSVYSKNNPNLLFSMCGFEVRILPRQRMEEVVSNDEGVWDLVDERTKQRTAKAYLKVSEEEIKKFDSRIRGILMASGSTTFTKVAAKWNTSLISLFTYFREAIVATEPLLDILVKGETRIQNRVKLGLNSKMPTRFPPAVFYTPKELGGLGMISASHIL1406
IPASDLSWSKQTDTGITHFRAGMTHEDEKLIPTIFRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSWDRGIPRISTLFQRDRHTLAYDRGHRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTG1566
IPASDLSWSKQTDTGITHFRAGMTHEDEKLIPTIFRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSWDRGIPRISTLFQRDRHTLAYDRGHRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTG1566
FNSWEGLFWEKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRANVYVGFLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDICQILDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKG1726
FNSWEGLFWE--------------------------NRRFTLWWSPTINRANVYVGFLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDICQILDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKG1726
LITNKMWFDVQLRYGDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQSSVQEPFLNSSNYAELFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKT1886
LITNKMWFDVQLRYGDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQ------------YAELFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKT1886
GHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSALVRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSAAMSIDKLSDVVMKATEPQMVLFNIYDDWLDRISSYTAFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLWPSFTDE2046
GHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSALVRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSAAMSIDKLSDVVMKATEPQMVLFNIYDDWLDRISSYTAFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLWPSFTDE2046
QWITIESQMRDLILTEYGRKYNVNISALTQTEIKDIILG2085
QWITIESQMRDLILTEYGRKYNVNISALTQTEIKDIILG2085
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SNU114 P36048 UniProtKBInterPro

P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
P36048
5y88.C
EHPYGKEVEVLMETKNTQSPQTPLVEPVTERTKLQEHTIFTQLKKNIPKTRYNRDYMLSMANIPERIINVGVIGPLHSGKTSLMDLLVIDSHKRIPDMSKNVELGWKPLRYLDNL181
EHPYGKEVEVLMETKNTQSPQTPLVEPVTERTKLQEHTIFTQLKKNIPKTRYNRDYMLSMANIPERIINVGVIGPLHSGKTSLMDLLVIDSHKRIPDMSKNVELGWKPLRYLDNL181
KQEIDRGLSIKLNGSTLLCTDLESKSRMINFLDAPGHVNFMDETAVALAASDLVLIVIDVVEGVTFVVEQLIKQSIKNNVAMCFVINKLDRLILDLKLPPMDAYLKLNHIIANIN296
KQEIDRGLSIKLNGSTLLCTDLESKSRMINFLDAPGHVNFMDETAVALAASDLVLIVIDVVEGVTFVVEQLIKQSIKNNVAMCFVINKLDRLILDLKLPPMDAYLKLNHIIANIN296
SFTKGNVFSPIDNNIIFASTKLGFTFTIKEFVSYYYAHSIPSSKIDDFTTRLWGSVYYHKGNFRTKPFENVEKYPTFVEFILIPLYKIFSYALSMEKDKLKNLLRSNFRVNLSQE411
SFTKGNVFSPIDNNIIFASTKLGFTFTIKEFVSYYYAHSIPSSKIDDFTTRLWGSVYYHKGNFRTKPFENVEKYPTFVEFILIPLYKIFSYALSMEKDKLKNLLRSNFRVNLSQE411
ALQYDPQPFLKHVLQLIFRQQTGLVDAITRCYQPFELFDNKTAHLSIPGKSTPEGTLWAHVLKTVDYGGAEWSLVRIYSGLLKRGDTVRILDTSQSESRQKRQLHDISKTETSNE526
ALQYDPQPFLKHVLQLIFRQQTGLVDAITRCYQPFELFDNKTAHLSIPGKSTPEGTLWAHVLKTVDYGGAEWSLVRIYSGLLKRGDTVRILDTSQSESR----------------510
DEDEDDETPSCEVEEIGLLGGRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITEAVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESGE641
---EDDETPSCEVEEIGLLGGRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITEAVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESGE641
HVILGNGELYMDCLLYDLRASYAKIEIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMIQDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYG756
HVILGNGELYMDCLLYDLRASYAKIEIKISDPLTVFSESCSNESFASIPVSN----------PGLSISVAAEPMDSKMIQDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYG756
WDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAP871
WDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAP871
LLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGISTGGFMSNDG986
LLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGISTGGFMSNDG986
PTLEKYISAELYAQLRENGLVP1008
PTLEKYISAELYAQLRENGLVP1008
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SNT309 Q06091 UniProtKBInterPro

Q06091
5y88.G
Q06091
5y88.G
Q06091
5y88.G
MDGLSFVDKGKIPDGYKNEIDQLVKKEFANIKREPVHPEIRGILAKRKGADNSVSTLTNALYTEYLKQRNNKKRRTPDFN80
MDGLSFVD---IPDGYKNEIDQLVKKEFANIK-----------------ADNSVSTLTNALYTEYLKQRNNKKRRTPDFN80
DDDDTLFLEEYRRKYPRIDTSRYIPNESSEVSLLGIVDSYLKHQEIVLDTLLPQTVSNQWRINNDYIRQTCTIVEEMNIQ160
DDDDTLFLEEYRRKYPRIDTSRYIPNESSEVSLLGIVDSYLKHQEIVLDTLLPQTVSNQWRINNDYIRQTCTIVEEMNIQ160
QRKQINDLEIYRKRL175
QRKQINDLEIYRKRL175
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SYF1 Q04048 UniProtKBInterPro

Q04048
5y88.H
Q04048
5y88.H
Q04048
5y88.H
Q04048
5y88.H
Q04048
5y88.H
Q04048
5y88.H
Q04048
5y88.H
RDCDRICLSYLELAIEQYDLAMIRHALASSLMKMEREMHRKVWDPVIKFVEEKVLPLTQLDSTQEDEEESTDEAELINVLLVKGFTKGGFISEEISENGSRGDIW210
RDCDRICLSYLELAI---DLAMIRHALASS----EREMHRKVWDPV----EEKVLPLTQLDST---EEESTDEAELIN--LVKGFTKGGFISEEISE-GSRGDIW210
SSHILERYLKVAPQQKRNESLATLALTRDNITIKSVYEKYLPQDENSGKYLPSSELPFELNFNYLASLEKLGLDNQYEEFMRQMNGIYPDKWLFLILSLAKYYIS315
SSHILERY----PQQKRNESLATL-LTRDNITIKSVYEKYLP-DENSGKYLPSSELP-ELNFNYLASLEKL----QYEEFMRQMNGIYP-KWLFLILSLAKYYIS315
RGRLDSCGDLLKKSLQQTLRYSDFDRIYNFYLLFEQECSQFILGKLKENDSKFFNQKDWTEKLQAHMATFESLINLYDIYLNDVALRQDSNLVETWMKRVSLQKS420
----DSCGDLLKKSLQQTLR-SDFDRIYNFYLLFEQEC-QFILGKLKEND---FNQKDWTEKLQAHMA---SLINLYDIYLND-----DSNLVETWMKRVS----416
AAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARELWTQSLKVPYPYIEDLEEIYLNWADRELDKEGVERAFSILEDALHVPTNPEILLEKY525
AAEKCNVYSEAILKIDP-KVGTPGSFGRLWCSYGDLYWRS-AISTARELWTQSLKVPYPYIEDLE-IYLNWADRELDKEGVE-----LEDALHVPTNPEILLEKY525
KNGHRKIPAQTVLFNSLRIWSKYIDYLEAYCPKDANSSDKIFNKTKMAYNTVIDLRLITPAMAENFALFLQNHYEVMESFQVYEKTIPLFPPEIQYELWIEYLEV630
-NGHRKIPAQTVLFNSLR-WSKYIDYLEAYCPKDAN-------KTKMAYNTVIDL---TPAMAENFALFLQNHYEVMESFQVYEKTIPLFPPEIQYELWIEYLEV630
ATSHQLSSLSPEHIRFLFEKALKNLCSNGIDCKTIFIAYSVFEERISGLISKSIEILRRGAVIGTVSVSTHLESRLQLWRMCISKAESTLGPSVTRELYQECIQI735
ATSHQ---LSPEHIRFLFEKALK---------KTIFIAYSVFEERIS--ISKSIEILRR----------------LQLWRMCISKAESTLGPSVTRELYQECIQ-734
LPNSKAVEFVIKFSDFESSIGETIRAREILAYGAKLLPPSRNTELWDSFEIFELKHGDKETYKDMLKMKKVLESNMLIDSASVS819
----KAVEFVIKFSDFESSIG----AREILAYGAKLLPPS---ELWDSFEIFELKHGDK-TYKDMLKMKKVLESNMLIDSASVS819
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CLF1 Q12309 UniProtKBInterPro

Q12309
5y88.I
Q12309
5y88.I
Q12309
5y88.I
Q12309
5y88.I
Q12309
5y88.I
Q12309
5y88.I
Q12309
5y88.I
DILDLEELREYQRRKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLP130
DILDLEELREYQRRKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLP130
RVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLA225
RVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLA225
IDTVANLQNLQIWSDMEVAKLVNSFAHWEAAQQEYERSSALYQIAIEKWPSNQLLKAGLLDFEKQFGDINSIEETISYKRKMEYETILSNNAYDY320
IDTVANLQNLQIWSDMEVAKLVNSFAHWEAAQQEYERSSALYQIAIEKWP-------------------NSIEETISYKRKMEYETILSNNAYDY320
DTWWLYLDLISESFPKQIMQTFEKAIVDSRPKELSKNVQWKRYIYLWMRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLI415
DTWWLYLDLISES------QTFEKAIVDSRPKELS-NVQWKRYIYLWMRYICYVE----NSLLEEELFQ---DDIIPHKHFTFSKIW-MY-KFLI415
RHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLTKEAK510
RHDDVPKARK-LGKAIGLCPKAKTFKGYI-----LKEFDRVRKIYEKFI---PSDLQIWSQYGEL----GDWDRVRGIYTIAL---SDFLTKEAK510
IVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEFAMYQTSTPTEQQLLDLAKLQSENVDEDIEFEITDENKLEARKVFEEAIVFFKEK605
IVLLQKY-TFETESQEFEKAR-L-RR-LELNQYSPQSWIEFAMY----PTEQQLLDLAKLQSENVD---EFEITDENKLEARKVFEEA-VFFKEK605
DDKQGRLSILEALKDYEETYGTELDQETVKKRFPKV641
DDKQGRLSILEALKDYE--YGTELDQETVKKRFPKV641
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CEF1 Q03654 UniProtKBInterPro

Q03654
5y88.J
Q03654
5y88.J
Q03654
5y88.J
Q03654
5y88.J
Q03654
5y88.J
Q03654
5y88.J
KGGVWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKLNFTEFSKEEDAQLLDLARELPNQWRTIADMMARPAQVCVERYNRLLESEDSGG113
KGGVWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKLNFTEFSKEEDAQLLDLARELPNQWRTIADMMARPAQVCVERYNRLLESEDS--111
AALSTGVTDLKAGDINPNAETQMARPDNGDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIV218
-------------------------------EDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIV218
YEQAPMPGIYDTSTEDRQIKKKFEQFERKVNRKGLDGNKDKPSKKNKDKKRKHDENEHVEKAALGESTTLTDEYKKPKLILSAPGTKQGKVTYKKKLESKRQKLI323
YEQAPMPGIYDTSTEDRQIKKKFEQFERKVNRKGL----------------------------------------------------------------------253
EAQATGTVLTPKELLPHDSGQEDNERSNIKSGKQLKSRIRKFLVQMFASLPSPKNDFEIVLSEDEKEEDAEIAEYEKEFENERAMNEEDNFIEPPSQNDAPRVSL428
--------LTPKELLPHDSGQEDNERSNIKSGKQLKSRIRKF----FASLPSPKNDFEI----DEKEEDAEIAEYEKE---------EDNFIEPPSQ---PRVSL428
VAVPLAYSTLPIPEFKNNPQSAIDNKYNLLVANAINKEPHMVPEDTVDFLKEVESRMQHITQGRTSMKIQFKTAMPPTEVLLESIQSKVESIEQLQRKLQHVQPL533
VAVPLAYSTL-----KNNPQSAIDNKYNLLVANAINKEPHM------------ESRMQHITQGRTSMKIQFKTAMPPTEVLLESIQSKVESIEQLQRKLQHVQPL533
EQQNNEMCSTLCHHSLPALIEGQRKYYADYYAYRQEIRSLEGRRKRLQAMLNSS587
EQQNNEMCSTLCHHSLPALIEGQRKYYADYYAYRQEIRSLEGRRKRLQAMLNSS587
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SYF2 P53277 UniProtKBInterPro

P53277
5y88.K
P53277
5y88.K
RGGISYDQLAKLSYEKTLRNLATQTQNSSKQDSSADEEDNKNVPKKGRIGKVQKDTKTGKITIADDDKLVNKLAVSLQSESKKRYEARKRQMQNAKTLYGVESFI196
RGGISYDQLAKLSYEKTLRNLATQTQNSSKQD------------------KVQKDTKTGKITIADDDKLVNKLAVSLQSESKKRYEARKRQMQNAKTLYGVESFI196
NDKNKQFNEKLSRES211
NDKNKQFNEKLSRES211
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor BUD31 P25337 UniProtKBInterPro

P25337
5y88.L
P25337
5y88.L
MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRSRYIYTLYYKRKAISKDLYDW80
MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRSRYIYTLYYKRKAISKDLYDW80
LIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNNGSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCASTD157
LIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNNGSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCASTD157
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SLT11 P38241 UniProtKBInterPro

P38241
5y88.M
P38241
5y88.M
P38241
5y88.M
P38241
5y88.M
DEINEPPPNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRNICQCCMLDSRWHIPIQLRDHLISLVNEE97
DEINEPPPNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRNICQCCMLDSRWHIPIQLRDHLISLVNEE97
NVMTEEAKNDMMKRFLSLKNVKLGGAQITSDPSEADNIVDKLKNILLRATSDGPSTPLIKNTTALYKNEKGANEVKNLEKYASVDISHILKKLPL192
NVMTEEAKNDMMKRFLSLKNVKLGGAQIT------------------------------------------------------------------126
NESFLKNPSTKSFFLYNIDASIPEWKITDTVSQLLGIKKWKDGNSLSLIVNHKAKCGGLRFQSSELGERFVSKISETLVTPKGLKRGVLLIDRFR287
-----------------IDASIP--------SQLLGIKKWKDGNSLSLIVNHKAKCGGLRFQS-----------SETLVTPKGLKRG--LIDRFR287
I288
I288
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CWC2 Q12046 UniProtKBInterPro

Q12046
5y88.N
Q12046
5y88.N
Q12046
5y88.N
Q12046
5y88.N
MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKGM80
MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKGM80
CCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRI160
CCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRI160
RFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE240
RFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE240
ELKLESLNMMVHLINNNTNSA261
ELKLESLNMMVHLINNNTNSA261
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor PRP46 Q12417 UniProtKBInterPro

Q12417
5y88.O
Q12417
5y88.O
IVNRYEKLLSQRPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGS340
IVNRYEKLLSQRPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGS340
LLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWKQDETATKESEPGLAWNPNLS447
LLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWKQDETATKESEPGLAWNPNLS447
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CWC15 Q03772 UniProtKBInterPro

Q03772
5y88.P
Q03772
5y88.P
HRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKFKEEENLRANCAQEDRSNDKSLEEAVMNEEKQDVVGSGNLQETRSEKDQKDSLQELLV99
HRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRK----------------------------------------------------------41
TQKNKVEDKAELEGNEQLKGGNSSRRSWRKGTAFGRHKVTKETNIKEHATKKSASGYINDMTKSEYHQEFLHKHVR175
--------------------------SWRKGTAFGR-------------------GYINDMTKSEYHQEFLHKHVR175
Created with Raphaël 2.2.0

Pre-mRNA-processing protein 45 P28004 UniProtKBInterPro

P28004
5y88.Q
P28004
5y88.Q
LTDQIAKNVKLDDFIPKRQSNFELSVPLPTKAEIQECTARTKSYIQRLVNAKLANSNNRASSRYVTETHQAPANLLLNNSHHIEVVSKQMDPLLPRFVGKKARKVVAPTENDEVVPVLHMDGSNDRGEADPNEWKIPAAVSNWKNPNGYTVALERRVGKALDNEN194
LTDQIAKNVKLDDFIPKRQSNFELSVPLPTKAEIQECTARTKSYIQRLVNAKLANSNNRASSRYV-----APANLLLNNSHHIEVVSKQMDPLLPRFVGKKARKVVAPTENDEVVPVLHM------GEADPNEWKIPAAVSNWKNPNGYTVALERRV------EN194
NTINDGFMKLSEALENADKKARQEIRSKMELKRLAMEQEMLAKESKLKELSQR247
NTINDGFMKLSEALENADKKARQEIRSKMELKRLAMEQEMLAKESKLKELSQR247
Created with Raphaël 2.2.0

Protein CWC16 P28320 UniProtKBInterPro

P28320
5y88.R
LEKRLAKIQQEQEDDEELENLRKKNLEMSQRAEMINRSKHAQQEKA211
LEKRLAKIQQEQEDDEELENLRKKNLEMSQRAEMINRSKHAQQEKA211
Created with Raphaël 2.2.0

Pre-mRNA-processing factor 17 P40968 UniProtKBInterPro

P40968
5y88.S
FTKSELKRRRKTRKGDGPWGSWS73
FTKSELKRRRKTRKGDGPWGSWS73
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CWC23 P52868 UniProtKBInterPro

P52868
5y88.T
P52868
5y88.T
LNLYDVLELPTPLDVHTIYDDLPQIKRKYRTLALKYHPDKHPDNPSIIHKFHLLSTATNILTNADVRPHYDRWLIEFLRKTNDIERNKLIQKLEESESSTIPTTTPHPDLLQIQRHGELLRKLKH138
LNLYDVLELPT-------YDDLPQIKRKYRTLALKYHPDKH-------HKFHLLSTATNILTNADVRPHYDRW-----RKTNDIERNKLIQKLEESESSTI-------DLLQIQRHGELLRKLKH138
FNLPYGDW146
FNLPYGDW146
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SPP382 Q06411 UniProtKBInterPro

Q06411
5y88.U
Q06411
5y88.U
Q06411
5y88.U
Q06411
5y88.U
Q06411
5y88.U
Q06411
5y88.U
Q06411
5y88.U
GSGITTPIETQSRPMHNAGLGMFSNTNSSNYHSENEDYLSSEDEVVEGIEQVKFNKTSTEVLGEALLNDSGDMTIVRTLRELRLAGVQLPESILK178
GSGITTPIETQSRPMHNAGLGMFSNTNSSNYHSENEDYLSSEDEVV-----VKFNKTSTEVLGEALLNDSG----VRTLRELRLAGVQLPESILK178
ELDPLNAVPKPKKDVVVEILQELLGIEKSLEAIRQRTSPLEVQVKEYYGQERLLSELEVTLRDESKHVSLYDKIGAILKLSDDELIDRLTSCLLR273
------AVPKPKKDVVVEILQELLG---SLEAIRQRTSPLEVQVKEYYGQ---LSELEVTLRDESKHVSLYDKIG-----SDDELIDRLTSCLLR273
KELLIEFDLDHLEKPNDILDELTQIIELLAYRMDTTSKFLNRTQTTIFKVIYPKLKKFWEGFDMTKSKIDSAITLLLDFQQVLSFIGCKEHIMEE368
KELLIEF----LEKPNDILDELTQIIELLAYRM---SKFLNRTQTTIFKVIYPKLKKF------TKSKIDSAITLLLDFQ--LSFIGCKEHIMEE368
FVYPKLLQELDNWELHDEVDHVSPRIWVLDFMVLIDDKIKDTIVDKIEAKFFAYCKNWYHRESFCITNSDIIFIKELICERRYYKILCKEFLPKF463
----KLLQELDNWELHDEVDHVSPRI-------LIDDKIKDTIVDKIEAK------NWYHRESFCITNSDIIFIK-----RRYYKILCKEFLPKF463
LDELWERHNDPIYELEDWKEKQEWKEKDSGFFYFMKKLRSYTHYFHPKQYELMMRGTFNNINKILYQWHLYSTVEDLHKSKWWLNWLMNTVFEHS558
L-----RHNDPIYELE------EWKEKDSGFFYFMKKLRS-------KQYELMMRGTFN-----LYQWHLYSTVEDL-------NWLMNTVFEHS558
LPTEIELSEIRKSYNIFAMSHRYHLDKSTLDEDFDLRQGLRNLMETQVIDDISQSEQEPTYTVQNIPLGKVSSSFKDVVEDYCLEKGYLISKIPN653
L---IELSEIRKSYNI------YHLDKSTLDE-----------------------------------LGKVSSSFKDVVEDYCLEKGYLISKIPN653
RYTQLPYGRDQDCIVPLFEIRNGKKKMEVALKHDILWVEDSSGTFKPIYLWALDL708
RYTQLPYGRDQDCIVPLFEIRNGKKKMEVALKHDILWVEDSSGTFKPIYLWALDL708
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor NTR2 P36118 UniProtKBInterPro

P36118
5y88.V
P36118
5y88.V
MQGFQDEMLALTDNQIAIQKDSKRKIIEKAINEVPYRTNEEWETQLLSKGNINKSNEKIITPLPVLFPDDDESGNSIERI280
MQGFQDEMLALTDNQIAIQKDSKRKIIEKAINEVPYRTNEEWETQLLSKGNI-------------LFPDDDESGNSIERI280
NEMVSKICLQRKKVEMRLQALEKT304
NEMVSKICLQRKKVEMRLQALEKT304
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 P53131 UniProtKBInterPro

P53131
5y88.W
P53131
5y88.W
P53131
5y88.W
P53131
5y88.W
P53131
5y88.W
P53131
5y88.W
P53131
5y88.W
PLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMS155
PLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMS155
VAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGR270
VAQRVAEEMDVKLGEEVGYS----NKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVP--268
TYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI385
-YPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI385
DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNY500
DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNY500
LACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSA615
LACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSA615
ADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN730
ADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN730
FQKGDVKLSLERIKEKVDRLNELKQ755
FQKGDVKLSLERIKEKVDRLNELKQ755
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein-associated protein B P40018 UniProtKBInterPro

P40018
5y88.X
5y88.6
IQVAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGTTLNIKVEKRVLGLTILRGEQILSTVVEDKPL102
IQVAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPK-------------------IKVEKRVLGLTILRGEQILSTVVEDKPL102
--VAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPK-------------------IKVEKRVLGLTILRGEQILSTVVEDKPL102
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein E Q12330 UniProtKBInterPro

Toggle Identical (Y7)
Q12330
5y88.(Y7)
5y88.7
Q12330
5y88.(Y7)
5y88.7
MVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITL89
MVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNS--------KGTPLGKILLKGDNITL89
MVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNS--------KGTPLGKILLKGDNITL89
ITS92
ITS92
ITS92
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein F P54999 UniProtKBInterPro

Toggle Identical (Z8)
P54999
5y88.(Z8)
5y88.8
PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIRE83
PVNPKPFLKGLVNHRVGVKLK--STEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIRE83
PVNPKPFLKGLVNHRVGVKLK--STEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIRE83
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein G P40204 UniProtKBInterPro

Toggle Identical (09)
P40204
5y88.(09)
5y88.9
VSTPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVIRGNSIISLEALDA76
VSTPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI------NNHQLGLQTVIRGNSIISLEALDA76
VSTPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI------NNHQLGLQTVIRGNSIISLEALDA76
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein Sm D3 P43321 UniProtKBInterPro

Toggle Identical (1a)
P43321
5y88.(1a)
5y88.a
NGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK85
NGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK85
NGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK85
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein Sm D1 Q02260 UniProtKBInterPro

Toggle Identical (2b)
Q02260
5y88.(2b)
5y88.b
Q02260
5y88.(2b)
5y88.b
MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPTASDNIA80
MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP---------------------------SDNIA80
MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP---------------------------SDNIA80
SLQYINIRGNTIRQIILPDSLNLDSLLVD109
SLQYINIRGNTIRQIILPDSLNLDSLLVD109
SLQYINIRGNTIRQIILPDSLNLDSLLVD109
Created with Raphaël 2.2.0

U2 small nuclear ribonucleoprotein A' Q08963 UniProtKBInterPro

Q08963
5y88.4
Q08963
5y88.4
Q08963
5y88.4
MKFTPSIVIDAPQYYVDHFNGKYNVDKCVILRDLQLETDSESMPSSLKHLTKPTHILDLTNNDLIMIPDLSRRDDIHTLL80
MKFTPSIVIDAPQYYVD---------------DLQLET--ESMPSSLKHLTKPTHILDLTNNDLIMIPDLSRRDDIHTLL80
LGRNNIVEVDGRLLPMNVQNLTLSNNSIRRFEDLQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVT160
LGRNNIVEVD-------VQNLTLSNNSIRRFEDLQRLRRA---LKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVT160
AE162
AE162
Created with Raphaël 2.2.0

U2 small nuclear ribonucleoprotein B'' P40567 UniProtKBInterPro

P40567
5y88.5
TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL111
TLYVSQLNEKINMQRLRVNLFLLFATFGEV--VSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL111
Created with Raphaël 2.2.0

Pre-mRNA-processing factor 19 P32523 UniProtKBInterPro

P32523
5y88.d
5y88.e
5y88.f
5y88.g
P32523
5y88.d
5y88.e
5y88.f
5y88.g
MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQQASLTESTNSATLKANYSIPNL80
MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIV---PSAQQASLTES-----------IPNL80
MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEI--SAQQASLTES-----------IPNL80
MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQQAS--------------SIPNL80
MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEI---AQQASLTES-----------IPNL80
LTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAAQLLMEKNEDSKDLPKSSQQ143
LTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAAQLLMEKNEDSKDLPKS---140
LTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAAQLLMEKNEDSKDLPKSSQ-142
LTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAAQLLMEKNEDSKDLPKSSQQ143
LTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAKLVAAQLLMEKNEDSKDLPK----139
Created with Raphaël 2.2.0
5Y88: Electron Microscopy, 3.46Å. "Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom". Released 2018-08-01.
1 × INOSITOL HEXAKISPHOSPHATE
1 × GUANOSINE-5'-TRIPHOSPHATE
6 × MAGNESIUM ION
6 × ZINC ION