O15498 | SWISS-MODEL Repository

O15498 (YKT6_HUMAN) Homo sapiens (Human)

Synaptobrevin homolog YKT6 UniProtKB InterPro STRING Interactive Modelling

198 aa; Sequence (Fasta) ; (Isoform 2); 16 identical sequences

It is possible new templates exist for this target since these models were created.

However, an attempt to improve models for this target was made on 2025-05-10. The outcome - failed for technical reasons.

Available Structures

3 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP	6j7f PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P53611; Q7Z6K3;	1-195	100	1×TLA; 1×FAR; 1×GER; 1×DPO;
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	Complex of GGTaseIII, farnesyl-Ykt6, and GGPP	6j7x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P53611; Q7Z6K3;	1-192	100	1×GRG; 1×FMT;
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	Complex of GGTaseIII and full-length Ykt6	6j74 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P53611; Q7Z6K3;	1-192	100	2×PO4; 1×ZN;
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2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6j7f.1.C	monomer	0.79	1-195		100.00
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	1sfc.1.A	monomer	0.58	132-193		24.24
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

1 SWISS-MODEL model built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	6j74.1.C	monomer	0.73	1-158		100.00
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Alignments