O95243 (MBD4_HUMAN) Homo sapiens (Human)

Methyl-CpG-binding domain protein 4 UniProtKBInterProSTRINGInteractive Modelling

580 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 5; Isoform 6)

Available Structures

18 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Human MBD4 glycosylase domain bound to DNA containing substrate analog 2'-deoxy-pseudouridinemonomer437-580
100GOL;K;
Human MBD4 glycosylase domain bound to DNA containing oxacarbenium-ion analog 1-aza-2'-deoxyribosemonomer437-580
100GOL;PEG;EDO;NA;CL;
Human MBD4 glycosylase domain bound to DNA containing an abasic sitemonomer436-578
100GOL;EDO;NA;
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding do…monomer438-579
99.3MG;
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding do…monomer438-579
98.59MG;
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding do…monomer438-578
99.29MG;
Structure of wild-type human MBD4 bound to a G:T mismatchmonomer438-577
100MG;
Structure of the glycosylase domain of MBD4monomer437-576
100
Crystal Structure of MBD4 Catalytic Domain Bound to Abasic DNAmonomer438-577
100K;
Structure of the glycosylase domain of MBD4 bound to AP site containing DNAmonomer437-574
100EDO;
Crystal structure of WT hMBD4 complexed with T:G mismatch DNAmonomer438-575
100
structure of the glycosylase domain of MBD4 bound to thymine containing DNAmonomer438-575
99.28
The C-terminal glycosylase domain of human MBD4monomer437-574
100
Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNAmonomer438-574
99.27
structure of glycosylase domain of MBD4 bound to 5hmU containing DNAmonomer438-574
99.27
Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNAmonomer439-574
99.27
Solution structure of MBD4 methyl-cytosine binding domain bound to methylated DNAmonomer80-148
100
Crystal structure MBD4 MBD domain in complex with methylated CpG DNAmonomer83-145
10011×UNX;

3 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7kz0.1.Amonomer0.85437-580
100.00
3vxv.1.Amonomer0.6184-148
83.82
1ub1.1.Amonomer0.5285-154
56.52

10 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 27kz0.1.Amonomer0.84431-574
100.00
Isoform 23vxv.1.Amonomer0.5884-148
83.82
Isoform 21ub1.1.Amonomer0.5285-154
56.52
Isoform 37kz1.1.Amonomer0.79436-540
98.25
Isoform 33vxv.1.Amonomer0.6184-148
83.82
Isoform 31ub1.1.Amonomer0.5285-154
56.52
Isoform 57kz1.1.Amonomer0.78436-562
95.59
Isoform 53vxv.1.Amonomer0.6384-148
83.82
Isoform 51ub1.1.Amonomer0.5285-154
56.52
Isoform 67kz0.1.Amonomer0.87119-262
100.00