P0AGD7 (SRP54_ECOLI) Escherichia coli (strain K12)

Signal recognition particle protein UniProtKBInterProSTRINGSTRINGInteractive Modelling

453 aa; Sequence (Fasta) 177 identical sequences

Sequence Features

Add
 107-114GTP
 190-194GTP
 248-251GTP
 5-82Signal recognition particle SRP54, helical bundle
IPR013822PF02881
 100-296Signal recognition particle, SRP54 subunit, GTPase domain
IPR000897PF00448
 329-427Signal recognition particle, SRP54 subunit, M-domain
IPR004125PF02978

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
RNC in complex with SRP Heteromer
P00634; P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
431×MG;ZN;GNP;5gaf1-434
Assess
RNC-SRP-SR complex early state Heteromer
P00634; P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P10121; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
433×MG;ZN;GNP;5gad4-434
Assess
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome Heteromer
P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0AG96; P0AG99; P0AGA2; P0C018; P10121; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
ZN;ALF;MG;GDP;5nco4-434
Assess
MODEL OF E. COLI SRP BOUND TO 70S RNCS Heteromer
O62798; P02413; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M6; P0A7M9; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
111×MG;2j282-431
Assess
The Crystal Structure of the Signal Recognition Particle (SRP) in Complex with its Receptor(SR) Heteromer
P10121;
GCP;MG;2xxa4-432
Assess
The structural basis of FtsY recruitment and GTPase activation by SRP RNA Heteromer
P10121;
ALF;MG;GDP;4c7o4-296
Assess
EM structure of ribosome-SRP-FtsY complex in closed state Heteromer
P02413; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M6; P0A7M9; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
110×MG;5aka328-436
Assess
RNC in complex with SRP-SR in the closed state Heteromer
P00634; P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
431×MG;ZN;5gag328-434
Assess
RNC in complex with SRP with detached NG domain Heteromer
P00634; P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7N4; P0A7N9; P0A7P5; P0A7Q1; P0A7Q6; P0A7R1; P0AA10; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P60422; P60438; P60624; P60723; P61175; P62399; P68919;
431×MG;ZN;5gah328-434
Assess
Atomic Model of the SRP-FtsY Early Conformation Heteromer
O07347; P83749;
2xkv371-414
Assess
STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A UNIVERSALLY CONSERVED PROTEIN FROM THE SI…monomer MG;K;1hq1328-431
Assess
STRUCTURE OF THE RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLEmonomer K;MG;1dul329-430
Assess
Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxd329-430
Assess
Variant 4 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxe329-430
Assess
Variant 5 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxf329-430
Assess
Variant 6 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxv329-430
Assess
Variant 2 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxb329-430
Assess
Variant 13 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxp329-430
Assess
Variant 14 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxq329-430
Assess
Variant 15 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxt329-430
Assess
Variant 9 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxl329-430
Assess
Variant 16 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxu329-430
Assess
Variant 8 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particlemonomer NCO;2pxk329-430
Assess
SRP ribonucleoprotein core complexed with cobalt hexamminemonomer K;CL;NCO;3lqx329-428
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -0.19 5nco.1.94-437
94.24ALF;
Assess
monomer -1.34 5gad.1.74-437
87.53
Assess