P0C6T7 (R1A_BCRP3) Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)
Replicase polyprotein 1a UniProtKBInterProInteractive Modelling
4380 aa; Sequence (Fasta)
Molecule Processing
| Non-structural protein 1 | |
| Non-structural protein 2 | |
| Non-structural protein 3 | |
| Non-structural protein 4 | |
| 3C-like proteinase | |
| Non-structural protein 6 | |
| Non-structural protein 7 | |
| Non-structural protein 8 | |
| Non-structural protein 9 | |
| Non-structural protein 10 | |
| Non-structural protein 11 |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 1649 | For PL-PRO activity | ||
| 1810 | For PL-PRO activity | ||
| 3279 | For 3CL-PRO activity | ||
| 3383 | For 3CL-PRO activity | ||
| 2201-2221 | Helical | ||
| 2312-2334 | Helical | ||
| 2349-2369 | Helical | ||
| 2753-2773 | Helical | ||
| 3020-3040 | Helical | ||
| 3059-3079 | Helical | ||
| 3081-3101 | Helical | ||
| 3103-3123 | Helical | ||
| 3140-3160 | Helical | ||
| 3562-3582 | Helical | ||
| 3584-3604 | Helical | ||
| 3610-3630 | Helical | ||
| 3657-3676 | Helical | ||
| 3683-3702 | Helical | ||
| 3726-3746 | Helical | ||
| 3754-3774 | Helical | ||
| 1727-1764 | C4-type | ||
| 4302-4318 | |||
| 4345-4358 | |||
| 179-180 | Cleavage | ||
| 818-819 | Cleavage; by PL-PRO | ||
| 3238-3239 | Cleavage; by PL-PRO | ||
| 3544-3545 | Cleavage; by 3CL-PRO | ||
| 3834-3835 | Cleavage; by 3CL-PRO | ||
| 3917-3918 | Cleavage; by 3CL-PRO | ||
| 4115-4116 | Cleavage; by 3CL-PRO | ||
| 4228-4229 | Cleavage; by 3CL-PRO | ||
| 4367-4368 | Cleavage; by 3CL-PRO | ||
| 9-144 | Non-structural protein NSP1, betacoronavirus IPR021590PF11501 | ||
| 183-423 | Nonstructural protein 2, N-terminal domain, coronavirus IPR043615PF19211 | ||
| 652-818 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
| 881-1026 | Non-structural protein NSP3, N-terminal, betacoronavirus IPR024358PF12379 | ||
| 1034-1139 | Macro domain IPR002589PF01661 | ||
| 1325-1467 | Non-structural protein NSP3, SUD-M domain, betacoronavirus IPR024375PF11633 | ||
| 1471-1536 | DPUP/SUD, C-terminal, betacoronavirus IPR022733PF12124 | ||
| 1539-1857 | Peptidase C16, coronavirus IPR013016PF08715 | ||
| 1892-1994 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
| 2236-2723 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
| 2763-3116 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
| 3141-3236 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
| 3267-3557 | Peptidase C30, coronavirus IPR008740PF05409 | ||
| 3573-3834 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
| 3835-3917 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
| 3918-4114 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
| 4116-4228 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
| 4237-4359 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 |
Sequence Alignments
Non-structural protein 3 819-2738; PRO_0000338125
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 0.34 | 2acf.1.A | 94.83 | ||
| Assess | |||||
| monomer | 1×ZN; 1×NHE; | 0.10 | 4m0w.1.A | 98.43 | |
| Assess | |||||
| monomer | 0.21 | 2wct.1.A | 96.59 | ||
| Assess | |||||
| monomer | -1.33 | 2kqw.1.A | 97.27 | ||
| Assess | |||||
Non-structural protein 8 3918-4115; PRO_0000338130
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -1.22 | 2ahm.1.F | 98.48 | ||
| Assess | |||||
| monomer | 0.64 | 2ahm.1.H | 98.48 | ||
| Assess | |||||
| monomer | 0.43 | 6nur.1.B | 98.48 | ||
| Assess | |||||