P0C6T7 (R1A_BCRP3) Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)

Replicase polyprotein 1a UniProtKBInterProInteractive Modelling

4380 aa; Sequence (Fasta)

Molecule Processing
Non-structural protein 1
Non-structural protein 2
Non-structural protein 3
Non-structural protein 4
3C-like proteinase
Non-structural protein 6
Non-structural protein 7
Non-structural protein 8
Non-structural protein 9
Non-structural protein 10
Non-structural protein 11

Sequence Features

Add
 1649For PL-PRO activity
 1810For PL-PRO activity
 3279For 3CL-PRO activity
 3383For 3CL-PRO activity
 2201-2221Helical
 2312-2334Helical
 2349-2369Helical
 2753-2773Helical
 3020-3040Helical
 3059-3079Helical
 3081-3101Helical
 3103-3123Helical
 3140-3160Helical
 3562-3582Helical
 3584-3604Helical
 3610-3630Helical
 3657-3676Helical
 3683-3702Helical
 3726-3746Helical
 3754-3774Helical
 1727-1764C4-type
 4302-4318
 4345-4358
 179-180Cleavage
 818-819Cleavage; by PL-PRO
 3238-3239Cleavage; by PL-PRO
 3544-3545Cleavage; by 3CL-PRO
 3834-3835Cleavage; by 3CL-PRO
 3917-3918Cleavage; by 3CL-PRO
 4115-4116Cleavage; by 3CL-PRO
 4228-4229Cleavage; by 3CL-PRO
 4367-4368Cleavage; by 3CL-PRO
 9-144Non-structural protein NSP1, betacoronavirus
IPR021590PF11501
 183-423Nonstructural protein 2, N-terminal domain, coronavirus
IPR043615PF19211
 652-818Non-structural protein 2, C-terminal domain, coronavirus
IPR043613PF19212
 881-1026Non-structural protein NSP3, N-terminal, betacoronavirus
IPR024358PF12379
 1034-1139Macro domain
IPR002589PF01661
 1325-1467Non-structural protein NSP3, SUD-M domain, betacoronavirus
IPR024375PF11633
 1471-1536DPUP/SUD, C-terminal, betacoronavirus
IPR022733PF12124
 1539-1857Peptidase C16, coronavirus
IPR013016PF08715
 1892-1994Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus
IPR032592PF16251
 2236-2723Coronavirus replicase NSP3, C-terminal
IPR043611PF19218
 2763-3116Coronavirus replicase NSP4, N-terminal
IPR043612PF19217
 3141-3236Non-structural protein NSP4, C-terminal, coronavirus
IPR032505PF16348
 3267-3557Peptidase C30, coronavirus
IPR008740PF05409
 3573-3834Non-structural protein 6, coronavirus
IPR043610PF19213
 3835-3917Non-structural protein NSP7, coronavirus
IPR014828PF08716
 3918-4114Non-structural protein NSP8, coronavirus-like
IPR014829PF08717
 4116-4228Non-structural protein NSP9, coronavirus
IPR014822PF08710
 4237-4359RNA synthesis protein NSP10, coronavirus
IPR018995PF09401

Sequence Alignments

Non-structural protein 3 819-2738; PRO_0000338125

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer 0.342acf.1.A1001-1167
94.83
Assess
monomer ZN;NHE;0.104m0w.1.A1540-1856
98.43
Assess
monomer 0.212wct.1.A1205-1468
96.59
Assess
monomer -1.332kqw.1.A1470-1525
97.27
Assess

Non-structural protein 8 3918-4115; PRO_0000338130

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer -1.222ahm.1.F3967-4109
98.48
Assess
monomer 0.642ahm.1.H3919-4109
98.48
Assess
monomer 0.436nur.1.B3994-4108
98.48
Assess