P16112 | SWISS-MODEL Repository

P16112 (PGCA_HUMAN) Homo sapiens (Human)

Aggrecan core protein UniProtKB Protein Atlas InterPro STRING Interactive Modelling

2530 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4)

Available Structures

4 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Immune Receptor	4md4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01903; P01911;	89-101	92.31	1×NAG; 2×NAG; 3×EDO;
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TFH TCR bound to MHC Class II IAd presenting aggrecan epitope	7rdv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P01921; P04228;	91-101	100	2×NAG;
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G1 domain of human aggrecan	9dft PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	29-350	100.0	3×NAG;
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G1 domain of human aggrecan bound to hyaluronan	9dff PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	30-350	100.0	1×NAG; 3×NAG;
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6 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
1tdq.1.B	monomer	0.78	2318-2443	2×CA;	92.13
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9dft.2.A	monomer	0.72	27-350		100.00
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9dft.2.A	monomer	0.71	475-675		64.36
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8r5m.1.A	monomer	0.59	2330-2506		26.44
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8hbc.1.A	monomer	0.56	2268-2442		28.90
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8a59.1.A	monomer	0.54	2321-2503		18.48
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

22 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	9dff.1.A	monomer	0.78	475-675		64.36
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Isoform 2	1tdq.1.B	monomer	0.75	2280-2405	2×CA;	92.13
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Isoform 2	9dft.2.A	monomer	0.72	27-350		100.00
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Isoform 2	9dft.2.A	monomer	0.70	477-675		65.00
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Isoform 2	8r5m.1.A	monomer	0.59	2292-2468		26.44
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Isoform 2	6inn.1.A	monomer	0.57	2278-2476		32.22
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Isoform 2	6inn.1.A	monomer	0.55	2282-2472		24.57
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Isoform 2	5e4l.1.A	monomer	0.54	2194-2404		36.36
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Isoform 2	8a59.1.A	monomer	0.54	2283-2465		18.38
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Isoform 3	1tdq.1.B	monomer	0.78	2280-2405	2×CA;	92.13
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Isoform 3	9dff.1.A	monomer	0.78	475-675		64.36
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Isoform 3	9dft.2.A	monomer	0.70	477-675		65.00
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Isoform 3	9dft.2.A	monomer	0.69	27-350		100.00
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Isoform 3	5ao6.1.A	monomer	0.58	2194-2404		36.36
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Isoform 4	1tdq.1.B	monomer	0.78	2356-2481	2×CA;	92.06
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Isoform 4	9dft.2.A	monomer	0.72	27-350		100.00
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Isoform 4	9dft.2.A	monomer	0.70	475-675		64.36
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Isoform 4	8r5m.1.A	monomer	0.60	2368-2543		27.17
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Isoform 4	6ino.2.A	monomer	0.55	2351-2546		25.00
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Isoform 4	8a59.1.A	monomer	0.54	2359-2541		19.02
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Isoform 4	6inu.2.A	monomer	0.54	2306-2479		38.27
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Isoform 4	8r5m.1.A	monomer	0.51	2378-2541		34.16
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P16112 (PGCA_HUMAN) Homo sapiens (Human)

Aggrecan core protein UniProtKBProtein AtlasInterProSTRINGInteractive Modelling

Available Structures

4 Experimental Structures

6 SWISS-MODEL models

22 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Aggrecan core protein UniProtKB Protein Atlas InterPro STRING Interactive Modelling