P17255 | SWISS-MODEL Repository

P17255 (VATA_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

V-type proton ATPase catalytic subunit A UniProtKB InterPro STRING Interactive Modelling

1071 aa; Sequence (Fasta) ; 2 identical sequences: Saccharomyces cerevisiae: N1P711, G2WBY0

It is possible new templates exist for this target since these models were created.

However, an attempt to improve models for this target was made on 2025-04-09. The outcome - only low quality models could be built.

Available Structures

26 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Crystal Structure of Yeast V1-ATPase in the Autoinhibited Form	5d80 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P32610; P39111; P41807; P48836;	20-1071	100
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Yeast RAVE bound to V-ATPase V1 complex	9cop PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P32610; P39111; P41807; P47104; P48836; P52286; Q03956;	22-1071	100.0	2×MG; 2×ADP;
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Crystal Structure of Yeast V1-ATPase in the Autoinhibited Form	5bw9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P32610; P41807; P48836;	20-1068	100
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CryoEM Structures of Reconstituted V-ATPase, Oxr1 bound V1	7fde PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P31412; P32610; P39111; P48836; Q08952;	24-1071	100
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CryoEM Structure of Reconstituted V-ATPase, state1	7fda PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12;	24-1071	100
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CryoEM Structures of Reconstituted V-ATPase,State2	7fdb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12;	24-1071	100
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CryoEM Structures of Reconstituted V-ATPase, state3	7fdc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12;	24-1071	100
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Complete V1 Complex from Saccharomyces cerevisiae	7tmm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P31412; P32610; P39111; P41807; P48836;	25-1071	100	1×ADP;
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V1 complex lacking subunit C from Saccharomyces cerevisiae, State 2	7tmp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P32610; P39111; P41807; P48836;	25-1071	100	1×ADP; 1×MG;
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V-ATPase from Saccharomyces cerevisiae, State 1	7tmr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6;	25-1071	100	1×ADP;
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Yeast V-ATPase state 1	3j9t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P25515; P31412; P32366; P32563; P32610; P39111; P41807; P48836;	25-1071	100
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Yeast V-ATPase state 2	3j9u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P25515; P31412; P32366; P32563; P32610; P39111; P41807; P48836;	25-1071	100
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Yeast V-ATPase state 3	3j9v PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P25515; P31412; P32366; P32563; P32610; P39111; P41807; P48836;	25-1071	100
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Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1)	5vox PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; Q3E7B6;	25-1071	100
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Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 2)	5voy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; Q3E7B6;	25-1071	100
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Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 3)	5voz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P23968; P25515; P31412; P32366; P32563; P32610; P32842; P39111; P41807; P48836; Q3E7B6;	25-1071	100
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V1 complex lacking subunit C from Saccharomyces cerevisiae, State 1	7tmo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P32610; P39111; P41807; P48836;	25-1070	100	1×ATP; 2×MG; 1×ADP;
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V1 complex lacking subunit C from Saccharomyces cerevisiae, State 3	7tmq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P16140; P22203; P32610; P39111; P41807; P48836;	25-1069	100	1×MG; 1×ADP;
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Crystal Structure of the Vma1-Derived Endonuclease with the Ligated Extein Segment	1um2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer	281-737	99.52
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CRYSTAL STRUCTURE OF PI-SCEI MINIPRECURSOR	1ef0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	283-741	99.53	2×ZN;
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PI-SCEI, A HOMING ENDONUCLEASE WITH PROTEIN SPLICING ACTIVITY	1vde PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	284-737	100.0
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CRYSTAL STRUCTURE OF THE VMA1-DERIVED ENDONUCLEASE BEARING THE N AND C EXTEIN PROPEPTIDES	1jva PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	282-741	99.06
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CRYSTAL STRUCTURE OF PI-SCEI IN C2 SPACE GROUP	1dfa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	284-737	100.0
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Crystal structure of the intein homing endonuclease PI-SceI bound to its substrate DNA (Ca2+ free)	1lwt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	284-737	100.0
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Crystal structure of the intein homing endonuclease PI-SceI bound to its recognition sequence	1lws PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	284-737	100.0	2×CA;
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Crystal structure of the S.cerevisiae Homing Endonuclease PI-SceI Domain I	1gpp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	283-466	97.09
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2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
1jva.2.A	monomer	0.76	279-741	98.95
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9b8p.1.C	monomer	0.50	24-1070	63.77
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P17255 (VATA_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

V-type proton ATPase catalytic subunit A UniProtKBInterProSTRINGInteractive Modelling

Available Structures

26 Experimental Structures

2 SWISS-MODEL models

Alignments

Background

Resolution

V-type proton ATPase catalytic subunit A UniProtKB InterPro STRING Interactive Modelling