P32366 (VA0D_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
V-type proton ATPase subunit d UniProtKBInterProSTRINGInteractive Modelling
345 aa; Sequence (Fasta) ;
9 identical sequences: Saccharomyces cerevisiae: N1NZY4, G2WJQ8, C8ZE54, C7GSK9, B5VNY4, A7A1W6, B3RHV5; Saccharomyces pastorianus: A0A6C1DWD4; Saccharomyces cerevisiae x Saccharomyces kudriavzevii: H0GKW3
It is possible new templates exist for this target since these models were created.
Available Structures
31 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Yeast V-ATPase Vo proton channel bound to nanobody 1WVA25 |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| Yeast V-ATPase Vo proton channel bound to nanobody 2WVA7 |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| Cryo-EM structure of bafilomycin A1 bound to yeast VO V-ATPase |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | 9×WEV; | |||
| Cryo-EM structure of archazolid A bound to yeast VO V-ATPase |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | 8×KJL; | |||
| 2.7A Yeast Vo state3 |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | 1×NAG; 30×PEE; 1×PPV; 1×EYR; | |||
| 3.6A Yeast Vo state3 prime |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| Yeast VO in complex with Vma12-22p |
Heteromer P0C5R9; P23968; P25515; P32341; P32563; P32842; P38784; P39111; P53262; Q3E7B6; | 100.0 | ||||
| Yeast V-ATPase state 1 |
Heteromer P16140; P17255; P22203; P25515; P31412; P32563; P32610; P39111; P41807; P48836; | 100 | ||||
| Yeast VO missing subunits a, e, and f in complex with Vma12-22p |
Heteromer P23968; P25515; P32341; P32842; P38784; P39111; P53262; | 100.0 | ||||
| Yeast V-ATPase state 2 |
Heteromer P16140; P17255; P22203; P25515; P31412; P32563; P32610; P39111; P41807; P48836; | 100 | ||||
| Yeast VO in complex with Vma21p |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P41806; P53262; Q3E7B6; | 100.0 | ||||
| Yeast V-ATPase state 3 |
Heteromer P16140; P17255; P22203; P25515; P31412; P32563; P32610; P39111; P41807; P48836; | 100 | ||||
| Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1) |
Heteromer P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; Q3E7B6; | 100 | ||||
| Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 2) |
Heteromer P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; Q3E7B6; | 100 | ||||
| Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 3) |
Heteromer P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; Q3E7B6; | 100 | ||||
| Yeast Vo motor in complex with 1 VopQ molecule |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| Yeast Vo motor in complex with 2 VopQ molecules |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| Yeast V-ATPase Vo proton channel bound to nanobody 2WVA149 |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| Yeast Vacuolar ATPase Vo in lipid nanodisc |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100 | ||||
| CryoEM Structure of Reconstituted V-ATPase, state1 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12; | 100 | ||||
| CryoEM Structures of Reconstituted V-ATPase,State2 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12; | 100 | ||||
| CryoEM Structures of Reconstituted V-ATPase, state3 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12; | 100 | ||||
| V-ATPase from Saccharomyces cerevisiae, State 1 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32563; P32610; P32842; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | 1×ADP; | |||
| V-ATPase from Saccharomyces cerevisiae, State 2 |
Heteromer B3LH69; P0C5R9; P23968; P25515; P32563; P32842; P41807; P48836; P53262; Q3E7B6; | 100 | 1×ADP; | |||
| Saccharomyces cerevisiae V-ATPase Vph1-VO |
Heteromer P0C5R9; P23968; P25515; P32563; P32842; P53262; Q3E7B6; | 100.0 | ||||
| V-ATPase from Saccharomyces cerevisiae, State 3 |
Heteromer B3LH69; P0C5R9; P23968; P25515; P32563; P32842; P41807; P48836; P53262; Q3E7B6; | 100 | 1×ADP; | |||
| Saccharomyces cerevisiae V-ATPase Stv1-VO |
Heteromer P0C5R9; P23968; P25515; P32842; P37296; P53262; Q3E7B6; | 100 | ||||
| Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 1 |
Heteromer B3LH69; P0C5R9; P16140; P22203; P23968; P25515; P31412; P32610; P32842; P37296; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | ||||
| Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 2 |
Heteromer B3LH69; P0C5R9; P16140; P22203; P23968; P25515; P31412; P32610; P32842; P37296; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | ||||
| Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 3 |
Heteromer B3LH69; P0C5R9; P16140; P22203; P23968; P25515; P31412; P32610; P32842; P37296; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | ||||
| Atomic model for the membrane-embedded motor of a eukaryotic V-ATPase |
Heteromer P23968; P25515; P32563; P32842; Q3E7B6; | 71.09 | ||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 6o7w.1.T | monomer | 0.77 | 100.00 | |||