P32610 (VATD_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
V-type proton ATPase subunit D UniProtKBInterProSTRINGInteractive Modelling
256 aa; Sequence (Fasta) ;
9 identical sequences: Saccharomyces cerevisiae: N1PA65, G2WCI3, C8Z6U2, C7GXD8, B5VH86, A6ZQQ0, B3LRW6; Saccharomyces pastorianus: A0A6C1DQ98; Saccharomyces boulardii: A0A0L8VS02
It is possible new templates exist for this target since these models were created.
However, an attempt to improve models for this target was made on 2025-04-02. The outcome - failed for technical reasons.
Available Structures
22 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Crystal Structure of Yeast V1-ATPase in the Autoinhibited Form |
Heteromer P16140; P17255; P22203; P39111; P41807; P48836; | 100 | ||||
| CryoEM Structures of Reconstituted V-ATPase, Oxr1 bound V1 |
Heteromer P16140; P17255; P22203; P31412; P39111; P48836; Q08952; | 100 | ||||
| CryoEM Structure of Reconstituted V-ATPase, state1 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12; | 100 | ||||
| CryoEM Structures of Reconstituted V-ATPase,State2 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12; | 100 | ||||
| CryoEM Structures of Reconstituted V-ATPase, state3 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; P53262; Q3E7B6; Q9UI12; | 100 | ||||
| Complete V1 Complex from Saccharomyces cerevisiae |
Heteromer P16140; P17255; P22203; P31412; P39111; P41807; P48836; | 100 | 1×ADP; | |||
| V1 complex lacking subunit C from Saccharomyces cerevisiae, State 1 |
Heteromer P16140; P17255; P22203; P39111; P41807; P48836; | 100 | 1×ATP; 2×MG; 1×ADP; | |||
| V1 complex lacking subunit C from Saccharomyces cerevisiae, State 2 |
Heteromer P16140; P17255; P22203; P39111; P41807; P48836; | 100 | 1×ADP; 1×MG; | |||
| V1 complex lacking subunit C from Saccharomyces cerevisiae, State 3 |
Heteromer P16140; P17255; P22203; P39111; P41807; P48836; | 100 | 1×MG; 1×ADP; | |||
| V-ATPase from Saccharomyces cerevisiae, State 1 |
Heteromer P0C5R9; P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | 1×ADP; | |||
| Yeast RAVE bound to V-ATPase V1 complex |
Heteromer P16140; P17255; P22203; P39111; P41807; P47104; P48836; P52286; Q03956; | 100 | 2×MG; 2×ADP; | |||
| Crystal Structure of Yeast V1-ATPase in the Autoinhibited Form |
Heteromer P16140; P17255; P22203; P41807; P48836; | 100.0 | ||||
| Yeast V-ATPase state 1 |
Heteromer P16140; P17255; P22203; P25515; P31412; P32366; P32563; P39111; P41807; P48836; | 100 | ||||
| Yeast V-ATPase state 2 |
Heteromer P16140; P17255; P22203; P25515; P31412; P32366; P32563; P39111; P41807; P48836; | 100 | ||||
| Yeast V-ATPase state 3 |
Heteromer P16140; P17255; P22203; P25515; P31412; P32366; P32563; P39111; P41807; P48836; | 100 | ||||
| Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 1 |
Heteromer B3LH69; P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32842; P37296; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | ||||
| Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 2 |
Heteromer B3LH69; P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32842; P37296; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | ||||
| Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 3 |
Heteromer B3LH69; P0C5R9; P16140; P22203; P23968; P25515; P31412; P32366; P32842; P37296; P39111; P41807; P48836; P53262; Q3E7B6; | 100 | ||||
| Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1) |
Heteromer P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; Q3E7B6; | 100 | ||||
| Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 2) |
Heteromer P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; Q3E7B6; | 100 | ||||
| Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 3) |
Heteromer P16140; P17255; P22203; P23968; P25515; P31412; P32366; P32563; P32842; P39111; P41807; P48836; Q3E7B6; | 100 | ||||
| Crystal Structure of the subunit DF-assembly of the eukaryotic V-ATPase. |
Heteromer P39111; | 100 | 3×GOL; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 3j9t.1.A | monomer | 0.75 | 100.00 | |||