P41235 (HNF4A_HUMAN) Homo sapiens (Human)

Hepatocyte nuclear factor 4-alpha UniProtKBInterProSTRINGInteractive Modelling

474 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; ) Identical sequences: Homo sapiens: F1D8T1

Sequence Features

Add
 85R -> W (in FRTS4; dbSNP:rs587777732) VAR_071951 dbSNP
 136R -> W (in MODY1; dbSNP:rs137853336) VAR_004668 dbSNP
 139T -> I (in dbSNP:rs1800961) VAR_004669 dbSNP
 264V -> M (found in a patient with non-insulin- dependent diabetes mellitus; does not affect activity; dbSNP:rs139779712) VAR_010600 dbSNP
 285E -> Q (in MODY1; results in loss of function) VAR_010601
 373M -> R (in MODY1; dbSNP:rs137853338) VAR_071952 dbSNP
 402V -> I (in NIDDM; reduced transactivation activity; dbSNP:rs137853337) VAR_004670 dbSNP
 445P -> S (in dbSNP:rs1063239) VAR_011785 dbSNP
 453V -> I (in dbSNP:rs776824742) VAR_062267 dbSNP
 57-132Nuclear receptor
 60-80NR C4-type
 96-120NR C4-type
 59-127Zinc finger, nuclear hormone receptor-type
IPR001628PF00105
 179-361Nuclear hormone receptor, ligand-binding domain
IPR000536PF00104

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Multi-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA Heteromer
Q15596;
MYR;ZN;4iqr58-377
Assess
Crystal structure of HNF4a LBD in complex with the ligand and the coactivator SRC-1 peptide Heteromer
Q15788;
MYR;1pzl146-378
Assess
HNF4alpha in complex with the corepressor EBP1 fragment Heteromer
Q9UQ80;
DAO;6cht151-376
Assess
Ligand binding domain human hepatocyte nuclear factor 4alpha: Apo formhomo-8-mer 4b7w175-376
Assess
Crystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with DNA: Diabetes Gene Producthomo-2-mer ZN;3cbb58-135
Assess
Crystal structure of HNF4a LBD in complex with the ligand and the coactivator PGC-1a fragmentmonomer MYR;3fs1148-377
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -3.46 4nqa.2.A55-377
42.59ZN;
Assess
monomer -4.15 3dzy.1.A57-374
42.86ZN;
Assess
monomer -4.63 3dzu.1.B57-376
29.28ZN;
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomerMYR;ZN;-1.234iqr.2.A58-377
100.00
Assess
Isoform 2monomerMYR;ZN;-2.854iqr.2.B58-377
100.00
Assess
Isoform 2monomerZN;-4.225uan.1.A58-376
42.59
Assess
Isoform 2monomerZN;-3.394nqa.2.A55-377
42.59
Assess
Isoform 2monomerZN;-4.173dzy.1.A57-374
42.72
Assess
Isoform 2monomerZN;-4.243dzu.1.B57-376
28.97
Assess
Isoform 3monomerMYR;ZN;-1.204iqr.2.A58-377
100.00
Assess
Isoform 3monomerMYR;ZN;-2.834iqr.2.B58-377
100.00
Assess
Isoform 3monomerZN;-4.235uan.1.A58-376
42.59
Assess
Isoform 3monomerZN;-3.654nqa.2.A55-377
42.59
Assess
Isoform 3monomerZN;-4.173dzy.1.A57-374
42.72
Assess
Isoform 3monomerZN;-4.303dzu.1.B57-376
28.97
Assess
Isoform 4monomerMYR;ZN;-1.214iqr.2.A88-407
100.00
Assess
Isoform 4monomerMYR;ZN;-2.824iqr.2.B88-407
100.00
Assess
Isoform 4monomerZN;-3.474nqa.2.A84-407
42.46
Assess
Isoform 4monomerZN;-4.215uan.1.A88-406
42.46
Assess
Isoform 4monomerZN;-4.153dzy.1.A87-404
42.72
Assess
Isoform 4monomerZN;-4.193dzu.1.B87-406
28.75
Assess
Isoform 5monomerMYR;ZN;-1.144iqr.2.A36-355
100.00
Assess
Isoform 5monomerMYR;ZN;-2.774iqr.2.B36-355
100.00
Assess
Isoform 5monomerZN;-3.213dzu.1.A35-352
43.70
Assess
Isoform 5monomerZN;-3.665uan.1.A36-352
43.27
Assess
Isoform 5monomerZN;-3.384nqa.2.A34-352
43.27
Assess
Isoform 5monomerZN;-4.553dzu.1.B35-354
28.97
Assess
Isoform 6monomerMYR;ZN;-1.184iqr.2.A36-355
100.00
Assess
Isoform 6monomerMYR;ZN;-3.224iqr.2.B36-355
100.00
Assess
Isoform 6monomerZN;-3.273dzu.1.A35-352
43.70
Assess
Isoform 6monomerZN;-3.715uan.1.A36-352
43.27
Assess
Isoform 6monomerZN;-3.464nqa.2.A34-352
43.27
Assess
Isoform 6monomerZN;-4.263dzu.1.B35-354
28.97
Assess
Isoform 7monomerMYR;ZN;-1.204iqr.2.A36-355
100.00
Assess
Isoform 7monomerMYR;ZN;-2.834iqr.2.B36-355
100.00
Assess
Isoform 7monomerZN;-4.225uan.1.A36-354
42.46
Assess
Isoform 7monomerZN;-4.424nqa.1.A32-353
42.46
Assess
Isoform 7monomerZN;-4.143dzy.1.A35-352
42.72
Assess
Isoform 7monomerZN;-4.483dzu.1.B35-354
28.97
Assess