P49848 | SWISS-MODEL Repository

P49848 (TAF6_HUMAN) Homo sapiens (Human)

Transcription initiation factor TFIID subunit 6 UniProtKB InterPro STRING Interactive Modelling

677 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4)

It is possible new templates exist for this target since these models were created.

Available Structures

28 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positione…	8was PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
Download Compare Structure Assessment
TFIID in rearranged conformation	7egi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P52655; P52657; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	6-473	100.0
Download Compare Structure Assessment
Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positione…	8wao PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
Download Compare Structure Assessment
Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positione…	8war PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
Download Compare Structure Assessment
Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positione…	8wap PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
Download Compare Structure Assessment
SCP promoter-bound TFIID-TFIIA in initial TBP-loading state	7egd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P52655; P52657; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	6-473	100.0
Download Compare Structure Assessment
Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positione…	8wal PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×W0F; 1×MG;
Download Compare Structure Assessment
Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positione…	8wan PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
Download Compare Structure Assessment
TFIID in canonical conformation	7ege PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	6-473	100.0
Download Compare Structure Assessment
SCP promoter-bound TFIID-TFIIA in post TBP-loading state	7egj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P52655; P52657; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	6-473	100.0
Download Compare Structure Assessment
Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positione…	8wak PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×W0F; 1×MG;
Download Compare Structure Assessment
Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positione…	8waq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
Download Compare Structure Assessment
TFIID-based holo PIC on SCP promoter	7egb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	6-473	100.0	17×ZN; 1×SF4; 1×MG;
Download Compare Structure Assessment
Human TFIID bound to promoter DNA and TFIIA	6mzm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P52655; P52657; Q12962; Q15542; Q15545; Q16514; Q16594; Q6P1X5; Q7Z7C8;	6-473	100
Download Compare Structure Assessment
Human TFIID canonical state	6mzl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	6-473	100.0
Download Compare Structure Assessment
Human TFIID BC core	6mzc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; Q12962; Q15542; Q16514; Q16594; Q6P1X5; Q7Z7C8;	6-473	100
Download Compare Structure Assessment
TFIID-based intermediate PIC on PUMA promoter	7ega PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	9-473	100.0	10×ZN; 1×MG;
Download Compare Structure Assessment
TFIID-based core PIC on PUMA promoter	7eg8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	9-473	100.0	9×ZN; 1×MG;
Download Compare Structure Assessment
p53-bound TFIID-based core PIC on HDM2 promoter	7edx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	9-473	100.0	9×ZN; 1×MG;
Download Compare Structure Assessment
TFIID-based intermediate PIC on SCP promoter	7eg9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P29083; P29084; P35269; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	9-473	100.0	10×ZN; 1×MG;
Download Compare Structure Assessment
TFIID-based core PIC on SCP promoter	7eg7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P52655; P52657; P60899; Q00403; Q12962; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	9-473	100.0	9×ZN; 1×MG;
Download Compare Structure Assessment
p53-bound TFIID-based holo PIC on HDM2 promoter	7egc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	9-473	100.0	16×ZN; 1×SF4; 1×MG;
Download Compare Structure Assessment
TFIID lobe C subcomplex	7egh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21675; Q15545; Q6P1X5; Q7Z7C8;	207-473	100
Download Compare Structure Assessment
Structure of human TFIID-IIA bound to core promoter DNA	5fur PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P20226; P21675; P52655; P52657; Q15545; Q6P1X5; Q7Z7C8;	213-436	100
Download Compare Structure Assessment
TFIID lobe B subcomplex	7egg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; Q12962; Q15542; Q16514; Q16594; Q7Z7C8;	6-150	100
Download Compare Structure Assessment
TFIID lobe A subcomplex	7egf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; Q12962; Q15542; Q15543; Q15544; Q16514; Q16594; Q5VWG9;	9-151	100
Download Compare Structure Assessment
Crystal structure of the human TAF5-TAF6-TAF9 complex	6f3t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q15542; Q16594;	6-92	100	2×CL;
Download Compare Structure Assessment
Human TFIID Lobe A canonical	6mzd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; Q12962; Q15542; Q15543; Q15544; Q16514; Q16594; Q5VWG9;	6-77	100
Download Compare Structure Assessment

3 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
7ege.1.O	monomer	0.68	9-473	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
7eg7.1.V	monomer	0.68	9-473	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
8wap.1.M	monomer	0.66	6-473	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

9 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	7ege.1.O	monomer	0.68	9-473	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 2	7eg7.1.V	monomer	0.68	9-473	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 2	8wap.1.M	monomer	0.66	6-473	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 3	7ege.1.O	monomer	0.67	46-510	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 3	7eg7.1.V	monomer	0.67	46-510	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 3	8wap.1.M	monomer	0.65	43-510	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 4	7eg7.1.V	monomer	0.66	9-463	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 4	7ege.1.O	monomer	0.66	9-463	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment
Isoform 4	8wap.1.M	monomer	0.63	6-463	100.00
Download ModelCIF format PDB format Model report Compare Structure Assessment

P49848 (TAF6_HUMAN) Homo sapiens (Human)

Transcription initiation factor TFIID subunit 6 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

28 Experimental Structures

3 SWISS-MODEL models

9 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Transcription initiation factor TFIID subunit 6 UniProtKB InterPro STRING Interactive Modelling