P63272 (SPT4H_HUMAN) Homo sapiens (Human)
Transcription elongation factor SPT4 UniProtKBProtein AtlasInterProSTRINGInteractive Modelling
117 aa; Sequence (Fasta) ;
104 identical sequences
Available Structures
26 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Crystal structure of the human transcription elongation factor DSIF, hSpt4/hSpt5 (176-273) |
Heteromer O00267; | 100 | 1×BME; 1×ZN; | |||
| Structural insights into human co-transcriptional capping - structure 4 |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P60899; | 100 | 1×ZN; | |||
| Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elo… |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| Structure of paused transcription complex Pol II-DSIF-NELF - post-translocated |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D0TE17; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 9×ZN; 1×MG; | |||
| Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) |
Heteromer A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| human co-transcriptional RNA capping enzyme RNGTT |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 1×MG; 8×ZN; 1×GTP; | |||
| Structural insights into human co-transcriptional capping - structure 6 |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; Q8N1G2; | 100 | 1×MGT; 8×ZN; 1×MG; 1×SAM; | |||
| human co-transcriptional RNA capping enzyme RNGTT-CMTR1 |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P60899; Q8N1G2; | 100 | 1×MG; 8×ZN; 1×GTP; | |||
| Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; O00267; P60899; Q6PD62; Q7KZ85; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| Structure of an RNA polymerase II-DSIF transcription elongation complex |
Heteromer A5PJW8; F2Z4H3; G3MZY8; O00267; Q1JQ91; Q2T9T3; Q32P73; Q32P78; Q32P79; Q32PE0; Q3T0Q3; Q3ZBC0; Q5E9B8; | 100 | 8×ZN; 1×MG; | |||
| Structure of paused transcription complex Pol II-DSIF-NELF |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; O00267; P60899; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 1×MG; 9×ZN; | |||
| Paused elongation complex of mammalian RNA polymerase II with nucleosome (PEC2-nuc) |
Heteromer A0A0B8RVL1; A0A481BYI6; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LSI7; O00267; P04908; P06899; P18615; P23193; P60899; P62805; P84243; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 9×ZN; 1×MG; | |||
| Arrested elongation complex of mammalian RNA polymerase II with nucleosome (AEC1-nuc) |
Heteromer A0A0B8RVL1; A0A481BYI6; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LSI7; O00267; P04908; P06899; P18615; P60899; P62805; P84243; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 9×ZN; 1×MG; | |||
| Arrested elongation complex of mammalian RNA polymerase II with nucleosome (AEC2-nuc) |
Heteromer A0A0B8RVL1; A0A481BYI6; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LSI7; O00267; P04908; P06899; P18615; P60899; P62805; P84243; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 9×ZN; 1×MG; | |||
| Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex |
Heteromer A0A287ADR4; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; A0A8J1LZU9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P62799; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| Structure of active transcription elongation complex Pol II-DSIF-ELL2-EAF1(composite structure) |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O00472; P60899; Q96JC9; | 100 | 1×MG; 9×ZN; | |||
| RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, bp +27 |
Heteromer A0A0B8RVL1; A0A310TTQ1; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; I3LCH3; I3LSI7; O00267; P02281; P06897; P23193; P60899; P62799; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9BYW2; Q9GZS3; | 100 | 12×ZN; 1×MG; | |||
| RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 30 bp upstream |
Heteromer A0A0B8RVL1; A0A310TTQ1; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; I3LCH3; I3LSI7; O00267; P02281; P06897; P23193; P60899; P62799; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9BYW2; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-FACT nucleosome upstream |
Heteromer A0A0B8RVL1; A0A310TTQ1; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; I3LCH3; I3LSI7; O00267; P02281; P06897; P23193; P60899; P62799; Q08945; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9BYW2; Q9GZS3; Q9Y5B9; | 100 | 9×ZN; 1×MG; | |||
| Structure of paused transcription complex Pol II-DSIF-NELF - tilted |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; | 100 | 9×ZN; 1×MG; | |||
| Structural insights into human co-transcriptional capping - structure 3 |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; O60942; P60899; | 100 | 3×ZN; 1×MG; | |||
| RNA polymerase II elongation complex with DSIF, SPT6, and ELOF1 transcribing genomic DNA extracted … |
Heteromer O00267; O15514; P19387; P19388; P24928; P30876; P36954; P52434; P52435; P53803; P60002; P61218; P62487; P62875; Q7KZ85; | 100 | 10×ZN; 1×MG; | |||
| RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-hexasome, bp +27 |
Heteromer A0A0B8RVL1; A0A310TTQ1; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; I3LCH3; I3LSI7; O00267; P02281; P06897; P23193; P60899; P62799; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-nucleosome, bp +27 |
Heteromer A0A0B8RVL1; A0A310TTQ1; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; I3LCH3; I3LSI7; O00267; P02281; P06897; P23193; P60899; P62799; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 20 bp upstream |
Heteromer A0A0B8RVL1; A0A2R8YHB3; A0A310TTQ1; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A8D1DPV6; A0A8W4F9W9; B7Z4W0; F1RKE4; I3LCB2; I3LCH3; I3LSI7; P02281; P06897; P60899; P62799; Q6PD62; Q92541; Q96ST2; Q9BYW2; Q9GZS3; | 100 | 9×ZN; 1×MG; | |||
| The structure of INTAC-PEC complex |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P18615; P24928; P30153; P60899; P67775; Q5TA45; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9UL03; | 100 | 10×ZN; 2×MN; 1×MG; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 6gml.1.R | monomer | 0.82 | 1×ZN; | 100.00 | ||