SMTL ID : 9qeq.1

Structure of the transcribing Pol II-DSIF-SPT6-U1 snRNP complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
8 x ZN: ZINC ION(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhang, L. et al., Structure of a transcribing Pol II-DSIF-SPT6-U1 snRNP complex. Nat Commun (2025)
Release Date
2025-07-09
Peptides
DNA-directed RNA polymerase subunit: A
DNA-directed RNA polymerase subunit beta: B
DNA-directed RNA polymerase II subunit RPB3: C
RNA polymerase II subunit D: D
DNA-directed RNA polymerase II subunit E: E
DNA-directed RNA polymerases I, II, and III subunit RPABC2: F
DNA-directed RNA polymerase subunit: G
DNA-directed RNA polymerases I, II, and III subunit RPABC3: H
DNA-directed RNA polymerase II subunit RPB9: I
DNA-directed RNA polymerases I, II, and III subunit RPABC5: J
DNA-directed RNA polymerase II subunit RPB11-a: K
RNA polymerase II, I and III subunit K: L
Transcription elongation factor SPT6: M
Transcription elongation factor SPT4: Q
Transcription elongation factor SPT5: R
U1 small nuclear ribonucleoprotein 70 kDa: T
U1 small nuclear ribonucleoprotein A: U
Small nuclear ribonucleoprotein Sm D2: V
Small nuclear ribonucleoprotein F: W
Small nuclear ribonucleoprotein E: X
Small nuclear ribonucleoprotein G: Y
Small nuclear ribonucleoprotein Sm D3: Z
Small nuclear ribonucleoprotein-associated protein: 0
Small nuclear ribonucleoprotein Sm D1: 1
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
Q
Y
R
Z
T
b
U
c
V
e
W
f
X
g
Y
h
Z
i
0
j
1
k

DNA-directed RNA polymerase subunit

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase II subunit RPB3

RNA polymerase II subunit D

DNA-directed RNA polymerase II subunit E

DNA-directed RNA polymerases I, II, and III subunit RPABC2

DNA-directed RNA polymerase subunit

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase II subunit RPB9

DNA-directed RNA polymerases I, II, and III subunit RPABC5

DNA-directed RNA polymerase II subunit RPB11-a

RNA polymerase II, I and III subunit K

Transcription elongation factor SPT6

Transcription elongation factor SPT4

Transcription elongation factor SPT5

U1 small nuclear ribonucleoprotein 70 kDa

U1 small nuclear ribonucleoprotein A

Small nuclear ribonucleoprotein Sm D2

Small nuclear ribonucleoprotein F

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein G

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein-associated protein

Small nuclear ribonucleoprotein Sm D1

Related Entries With Identical Sequence

1b34.1 | 2c35.1 | 2c35.2 | 2c35.3 | 2c35.4 | 2f3i.1 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12 | 4v98.13 | 4v98.14 | 4v98.15 | 4v98.16 | 4v98.17 | 4v98.18  more...