Q03772 (CWC15_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Pre-mRNA-splicing factor CWC15 UniProtKBInterProSTRINGInteractive Modelling

175 aa; Sequence (Fasta) ; 3 identical sequences: Saccharomyces cerevisiae: C7GQF6, B3LGC1; Saccharomyces boulardii: A0A0L8VT96
Created with Raphaël 2.2.0102030405060708090100110120130140150160170MTTSHRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKFKEEENLRANCAQEDRSNDKSLEEAVMNEEKQDVVGSGNLQETRSEKDQKDSLQELLVTQKNKVEDKAELEGNEQLKGGNSSRRSWRKGTAFGRHKVTKETNIKEHATKKSASGYINDMTKSEYHQEFLHKHVRQ03772DisorderedSource: UniProtKBInterProSource: InterProSource: PDBhetero-oligomer 2-175Source: PDBhetero-oligomer 7-42

Available Structures

16 Experimental Structures

Description
PDB ID
Oligo-state
Range
Seq id (%)
Ligands
Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution Heteromer
P21374; P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P38302; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53913; P54999; Q02260; Q02775; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
2-175
100.0MG;K;IHP;GTP;ZN;
S. cerevisiae spliceosomal post-catalytic P complex Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
2-175
100.0MG;IHP;GTP;ZN;
Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
3-175
100.0IHP;GTP;MG;ZN;
Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
3-175
100.0IHP;GTP;MG;ZN;
Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom Heteromer
P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
3-175
100.0IHP;GTP;MG;ZN;
Post-catalytic P complex spliceosome with 3' splice site docked Heteromer
P24384; P25337; P28004; P28320; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
3-175
100.0MG;IHP;GTP;ZN;
Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstr… Heteromer
P0C074; P20095; P32524; P40204; Q02521; Q03654; Q07930;
3-175
100.0IHP;GTP;MG;CA; 15×ZN;
Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution Heteromer
P0C074; P20095; P25337; P28004; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P40968; P43321; P46947; P49955; P53277; P53333; P53769; P54999; Q02260; Q02554; Q02770; Q03375; Q03654; Q04048; Q04693; Q06091; Q06217; Q06835; Q07350; Q07930; Q12046; Q12309; Q12330; Q12417; Q99181;
3-175
100.0GTP;MG; 13×ZN;ADP;
Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom Heteromer
P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
3-175
100.0IHP;GTP;MG;ZN;
Structure of a spliceosome remodeled for exon ligation Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
4-175
100.0MG;K;IHP;GTP;ZN;
Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution Heteromer
P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53854; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
4-175
100.0GTP;MG;ZN;
Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom Heteromer
P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
4-175
100.0IHP;GTP;MG;ZN;
Structure of a spliceosome remodeled for exon ligation Heteromer
P25337; P28004; P33334; P33411; P36048; P38241; P40018; P40204; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q04048; Q06217; Q12046; Q12309; Q12330; Q12417;
4-175
100.0MG;K;IHP;GTP;ZN;
Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution Heteromer
P15938; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
4-175
100.0GTP;MG;ZN;
Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 a… Heteromer
P25337; P28004; P28320; P32523; P33334; P36048; P36118; P38241; P40018; P40204; P40567; P40968; P43321; P52868; P53131; P53277; P54999; Q02260; Q03654; Q04048; Q06091; Q06217; Q06411; Q08963; Q12046; Q12309; Q12330; Q12417;
5-175
100.0IHP;GTP;MG;ZN;
Structure of the core of the yeast spliceosome immediately after branching Heteromer
P21374; P25337; P28004; P28320; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q04048; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417;
7-42
100MG;ZN;GTP;

1 SWISS-MODEL model

Template
Oligo-state
QMEANDisCo
Range
Ligands
Trg-Tpl Seq id (%)
5lj3.1.Rmonomer0.517-42
97.71

Alignments

CWC15 Q03772 UniProtKBInterPro

Q03772
5lj3.R
PQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKF42
PQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKF42
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor 8 P33334 UniProtKBInterPro

P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
P33334
5lj3.F
YTPKAEMPPEHLRKIINTHSDMASKMYNTDKKAFLGALKYLPHAILKLLENMPHPWEQAKEVKVLYHTSGAITFVNETPRVIEPVYTAQWSATWIAMRREKRDRTHFKRMRFPPF242
YTPKAEMPPEHLRKIINTHSDMASKMYNTDKKAFLGALKYLPHAILKLLENMPHPWEQAKEVKVLYHTSGAITFVNETPRVIEPVYTAQWSATWIAMRREKRDRTHFKRMRFPPF242
DDDEPPLSYEQHIENIEPLDPINLPLDSQDDEYVKDWLYDSRPLEEDSKKVNGTSYKKWSFDLPEMSNLYRLSTPLRDEVTDKNYYYLFDKKSFFNGKALNNAIPGGPKFEPLYP357
DDDEPPLSYEQHIENIEPLDPINLPLDSQDDEYVKDWLYDSRPLEEDSKKVNGTSYKKWSFDLPEMSNLYRLSTPLRDEVTDKNYYYLFDKKSFFNGKALNNAIPGGPKFEPLYP357
REEEEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPRSVRIPWYNNPVSCIIQNDEEYDTPALFFDPSLNPIPHFIDNNSSLNVSNTKENGDFTLPEDFAPLLAEEEELILPN472
REEEEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPRSVRIPWYNNPVSCIIQNDEEYDTPALFFDPSL---------------------------EDFAPLLAEEEELILPN472
TKDAMSLYHSPFPFNRTKGKMVRAQDVALAKKWFLQHPDEEYPVKVKVSYQKLLKNYVLNELHPTLPTNHNKTKLLKSLKNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIHRKG587
TKDAMSLYHSPFPFNRTKGKMVRAQDVALAKKWFLQHPDEEYPVKVKVSYQKLLKNYVLNELHPTLPTNHNKTKLLKSLKNTKYFQQTTIDWVEAGLQLCRQGHNMLNLLIHRKG587
LTYLHLDYNFNLKPTKTLTTKERKKSRLGNSFHLMRELLKMMKLIVDTHVQFRLGNVDAFQLADGIHYILNHIGQLTGIYRYKYKVMHQIRACKDLKHIIYYKFNKNLGKGPGCG702
LTYLHLDYNFNLKPTKTLTTKERKKSRLGNSFHLMRELLKMMKLIVDTHVQFRLGNVDAFQLADGIHYILNHIGQLTGIYRYKYKVMHQIRACKDLKHIIYYKFNKNLGKGPGCG702
FWQPAWRVWLNFLRGTIPLLERYIGNLITRQFEGRSNEIVKTTTKQRLDAYYDLELRNSVMDDILEMMPESIRQKKARTILQHLSEAWRCWKANIPWDVPGMPAPIKKIIERYIK817
FWQPAWRVWLNFLRGTIPLLERYIGNLITRQFEGRSNEIVKTTTKQRLDAYYDLELRNSVMDDILEMMPESIRQKKARTILQHLSEAWRCWKANIPWDVPGMPAPIKKIIERYIK817
SKADAWVSAAHYNRERIKRGAHVEKTMVKKNLGRLTRLWIKNEQERQRQIQKNGPEITPEEATTIFSVMVEWLESRSFSPIPFPPLTYKNDTKILVLALEDLKDVYASKVRLNAS932
SKADAWVSAAHYNRERIKRGAHVEKTMVKKNLGRLTRLWIKNEQERQRQIQKNGPEITPEEATTIFSVMVEWLESRSFSPIPFPPLTYKNDTKILVLALEDLKDVYASKVRLNAS932
EREELALIEEAYDNPHDTLNRIKKYLLTQRVFKPVDITMMENYQNISPVYSVDPLEKITDAYLDQYLWYEADQRKLFPNWIKPSDSEIPPLLVYKWTQGINNLSEIWDVSRGQSA1047
EREELALIEEAYDNPHDTLNRIKKYLLTQRVFKPVDITMMENYQNISPVYSVDPLEKITDAYLDQYLWYEADQRKLFPNWIKPSDSEIPPLLVYKWTQGINNLSEIWDVSRGQSA1047
VLLETTLGEMAEKIDFTLLNRLLRLIVDPNIADYITAKNNVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANNPNEFMQFKSKEVEKAHPIRLYT1162
VLLETTLGEMAEKIDFTLLNRLLRLIVDPNIADYITAKNNVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANNPNEFMQFKSKEVEKAHPIRLYT1162
RYLDRIYMLFHFEEDEGEELTDEYLAENPDPNFENSIGYNNRKCWPKDSRMRLIRQDVNLGRAVFWEIQSRVPTSLTSIKWENAFVSVYSKNNPNLLFSMCGFEVRILPRQRMEE1277
RYLDRIYMLFHFEEDEGEELTDEYLAENPDPNFENSIGYNNRKCWPKDSRMRLIRQDVNLGRAVFWEIQSRVPTSLTSIKWENAFVSVYSKNNPNLLFSMCGFEVRILPRQRMEE1277
VVSNDEGVWDLVDERTKQRTAKAYLKVSEEEIKKFDSRIRGILMASGSTTFTKVAAKWNTSLISLFTYFREAIVATEPLLDILVKGETRIQNRVKLGLNSKMPTRFPPAVFYTPK1392
VVSNDEGVWDLVDERTKQRTAKAYLKVSEEEIKKFDSRIRGILMASGSTTFTKVAAKWNTSLISLFTYFREAIVATEPLLDILVKGETRIQNRVKLGLNSKMPTRFPPAVFYTPK1392
ELGGLGMISASHILIPASDLSWSKQTDTGITHFRAGMTHEDEKLIPTIFRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSWDRGIPRISTLFQRDRHTLAYDRG1507
ELGGLGMISASHILIPASDLSWSKQTDTGITHFRAGMTHEDEKLIPTIFRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSWDRGIPRISTLFQRDRHTLAYDRG1507
HRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTGFNSWEGLFWEKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRANVYVG1622
HRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTGFNSWEGLFWEKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRANVYVG1622
FLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDICQILDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGLITNKMWFDVQ1737
FLVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESIVFDICQILDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGLITNKMWFDVQ1737
LRYGDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQSSVQEPFLNSSNYAELFNNDIKLFV1852
LRYGDYDSHDISRYVRAKFLDYTTDNVSMYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQ---------SSNYAELFNNDIKLFV1852
DDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSALVRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSA1967
DDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHTSVWAGQKRLSQLAKWKTAEEVSALVRSLPKEEQPKQIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSA1967
AMSIDKLSDVVMKATEPQMVLFNIYDDWLDRISSYTAFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLWPSFTDEQWITIESQMRDLILTEYGRKYNVNISALTQTEIKDI2082
AMSIDKLSDVVMKATEPQMVLFNIYDDWLDRISSYTAFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLWPSFTDEQWITIESQMRDLILTEYGRKYNVNISALTQTEIKDI2082
ILG2085
ILG2085
Created with Raphaël 2.2.0

Protein CWC16 P28320 UniProtKBInterPro

P28320
5lj3.G
SERKAINKYYPPDYNPLEAEKLSRKMAKKLKTMNKSHASIRLMTPFSMRCLECNEYIPKSRKFNGKKELLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRN115
SERKAINKYYPPDYNPLEAEKLSRKMAKKLKTMNKSHASIRLMTPFSMRCLECNEYIPKSRKFNGKKELLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRN115
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CWC25 P53854 UniProtKBInterPro

P53854
5lj3.H
SGDLNLLKSWNPKLMKNRKKVWETEQDLITEQQKLNTRLKEIEKER48
SGDLNLLKSWNPKLMKNRKKVWETEQDLITEQQKLNTRLKEIEKER48
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SNU114 P36048 UniProtKBInterPro

P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
P36048
5lj3.I
GKEVEVLMETKNTQSPQTPLVEPVTERTKLQEHTIFTQLKKNIPKTRYNRDYMLSMANIPERIINVGVIGPLHSGKTSLMDLLVIDSHKRIPDMS165
GKEVEVLMETKNTQSPQTPLVEPVTERTKLQEHTIFTQLKKNIPKTRYNRDYMLSMANIPERIINVGVIGPLHSGKTSLMDLLVIDSHKRIPDMS165
KNVELGWKPLRYLDNLKQEIDRGLSIKLNGSTLLCTDLESKSRMINFLDAPGHVNFMDETAVALAASDLVLIVIDVVEGVTFVVEQLIKQSIKNN260
KNVELGWKPLRYLDNLKQEIDRGLSIKLNGSTLLCTDLESKSRMINFLDAPGHVNFMDETAVALAASDLVLIVIDVVEGVTFVVEQLIKQSIKNN260
VAMCFVINKLDRLILDLKLPPMDAYLKLNHIIANINSFTKGNVFSPIDNNIIFASTKLGFTFTIKEFVSYYYAHSIPSSKIDDFTTRLWGSVYYH355
VAMCFVINKLDRLILDLKLPPMDAYLKLNHIIANINSFTKGNVFSPIDNNIIFASTKLGFTFTIKEFVSYYYAHSIPSSKIDDFTTRLWGSVYYH355
KGNFRTKPFENVEKYPTFVEFILIPLYKIFSYALSMEKDKLKNLLRSNFRVNLSQEALQYDPQPFLKHVLQLIFRQQTGLVDAITRCYQPFELFD450
KGNFRTKPFENVEKYPTFVEFILIPLYKIFSYALSMEKDKLKNLLRSNFRVNLSQEALQYDPQPFLKHVLQLIFRQQTGLVDAITRCYQPFELFD450
NKTAHLSIPGKSTPEGTLWAHVLKTVDYGGAEWSLVRIYSGLLKRGDTVRILDTSQSESRQKRQLHDISKTETSNEDEDEDDETPSCEVEEIGLL545
NKTAHLSIPGKSTPEGTLWAHVLKTVDYGGAEWSLVRIYSGLLKRGDTVRILDTSQSESRQKRQLHDI-----------EDDETPSCEVEEIGLL545
GGRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITEAVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESG640
GGRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITEAVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESG640
EHVILGNGELYMDCLLYDLRASYAKIEIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMIQDLSRNTLGKGQNCL735
EHVILGNGELYMDCLLYDLRASYAKIEIKISDPLTVFSESCSNESFASIPVSN--------------ISVAAEPMDSKMIQDLSR----------725
DIDGIMDNPRKLSKILRTEYGWDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVN830
--------PRKLSKILRTEYGWDSLASRNVWSFYN---LINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVN830
IDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGL925
IDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGL925
GMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGISTGGFMSNDGPTLEKYISAELY998
GMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGISTGGFMSNDGPTLEKYISAELY998
Created with Raphaël 2.2.0

ISY1 P21374 UniProtKBInterPro

P21374
5lj3.J
P21374
5lj3.J
MSRNVDKANSVLVRFQEQQAESAGGYKDYSRYQRPRNVSKVKSIKEANEWKRQVSKEIKQKSTRIYDPSLNEMQIAELND80
MSRNVDKANSVLVRFQEQQAESAGGYKDYSRYQRPRNVSKVKSIKEANEWKRQVSKEIKQKSTRIYDPSLNEMQIAELND80
ELNNLFKEWKRWQWHID97
ELNNLFKEWKRWQWHID97
Created with Raphaël 2.2.0

CWC22

Target
5lj3.K
Target
5lj3.K
IKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRDIICKNVVDFTLNNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNILQCLSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYILQTQELSSTLRESLETLFEIRQKDYKSCENFNELTMAFDTLRQKLVEFKKKIYLVLKSSLSG230
IKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRDIICKNVVDFTLNNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNILQCLSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYILQTQELSSTLRESLETLFEIRQKDYKSCENFNELTMAFDTLRQKLVEFKKKIYLVLKSSLSG305
DEAAHKLLKLKIANNLKKSVVDIIIKSSLQESTFSKFYSILSERMITFHRSWQTAYNETFEQNYTQDIEDYETDQLRILGKFWGHLISYEFLPMDCLEESCPQGRIFIKFLFQELVNELGLDELQLRLNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSRL399
DEAAHKLLKLKIANNLKKSVVDIIIKSSLQESTFSKFYSILSERMITFHRSWQTAYNETFEQNYTQDIEDYETDQLRILGKFWGHLISYEFLPMDCLEESCPQGRIFIKFLFQELVNELGLDELQLRLNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSRL481
Created with Raphaël 2.2.0

PRP46 Q12417 UniProtKBInterPro

Q12417
5lj3.L
Q12417
5lj3.L
IVNRYEKLLSQRPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGS340
IVNRYEKLLSQRPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSWGLAEGS340
LLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWKQDETATKESEPGLAWNPN445
LLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWKQ---------PGLAWNPN445
Created with Raphaël 2.2.0

Pre-mRNA-processing protein 45 P28004 UniProtKBInterPro

P28004
5lj3.M
P28004
5lj3.M
P28004
5lj3.M
DQIAKNVKLDDFIPKRQSNFELSVPLPTKAEIQECTARTKSYIQRLVNAKLANSNNRASSRYVTETHQAPANLLLNNSHHIEVVSKQMDPLLPRF126
DQIAKNVKLDDFIPKRQSNFELSVPLPTKAEIQECTARTKSYIQRLVNAKLANSNNRA--------------LLLNNSHHIEVVSKQMDPLLPRF126
VGKKARKVVAPTENDEVVPVLHMDGSNDRGEADPNEWKIPAAVSNWKNPNGYTVALERRVGKALDNENNTINDGFMKLSEALENADKKARQEIRS221
VGKKARKVVAPTENDEVVPVLHMD--------DPNEWKIPAAVSNWKNPNGYTVALER---------NNTINDGFMKLSEALENADKKARQEIRS221
KMEL225
KMEL225
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor BUD31 P25337 UniProtKBInterPro

P25337
5lj3.N
P25337
5lj3.N
PRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRSRYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNN116
PRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRSRYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNN116
GSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCAST156
GSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCAST156
Created with Raphaël 2.2.0

CWC2 Q12046 UniProtKBInterPro

Q12046
5lj3.O
Q12046
5lj3.O
Q12046
5lj3.O
SWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKF117
SWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEALDCFGREKF117
ADYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDP232
ADYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDP232
AAQKRLQEELKLESLNMMVHLI254
AAQKRLQEELKLESLNMMVHLI254
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor SLT11 P38241 UniProtKBInterPro

P38241
5lj3.P
P38241
5lj3.P
P38241
5lj3.P
P38241
5lj3.P
NEPPPNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRNICQCCMLDSRWHIPIQLRDHLISLVNEENVM100
NEPPPNICEQCLGDEANIRMTKIPQGSECKICTLPFTLYHFKTSKRSNNIIKTLICVRCATQRNICQCCMLDSRWHIPIQLRDHLISLV----VM100
TEEAKNDMMKRFLSLKNVKLGGAQITSDPSEADNIVDKLKNILLRATSDGPSTPLIKNTTALYKNEKGANEVKNLEKYASVDISHILKKLPLNES195
TEEAKNDMMKRFLSLKNVKLGGAQITSDPSEADNIVDKLKNILL---------------------------------------------------144
FLKNPSTKSFFLYNIDASIPEWKITDTVSQLLGIKKWKDGNSLSLIVNHKAKCGGLRFQSSELGERFVSKISETLVTPKGLKRGVLLIDRFRIFI290
--------SFFLYN---SIPEWKITDTVSQLL-----------SLIVNHKAKCGGLRFQSSELGERFVSKI----------------------FI290
IPWSSGFSAASFGTNTAENIKLSLSLNKLIQLEL324
IPWS-----------TAENIKLSLSLNKLIQLEL324
Created with Raphaël 2.2.0

CEF1 Q03654 UniProtKBInterPro

Q03654
5lj3.Q
Q03654
5lj3.Q
Q03654
5lj3.Q
VWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKLNFTEFSKEEDAQLLDLARELPNQWRTIADMMARPAQVCVERYNRLLESEDSGGAAL116
VWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKLNFTEFSKEEDAQLLDLARELPNQWRTIADMMARPAQVCVERYNRL-----------105
STGVTDLKAGDINPNAETQMARPDNGDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIVYEQ221
---------------------------LEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIVYEQ221
APMPGIYDTSTEDRQIKKKFEQFERK247
APMPGIYDTSTEDRQIKKKFEQFERK247
Created with Raphaël 2.2.0

Pre-mRNA-splicing factor CWC21 Q03375 UniProtKBInterPro

Q03375
5lj3.S
SYNGIGLKSAKGSSTSGHVQRSLASNNRRRPQGSQQQRQQRQNAIKKASHDKASRPLAVQKQIETHMEKREIEVQVSELRDRLEEEETLSEEQIDKKCEALRAKLTNEWQ111
SYNGIGLKSAKGSSTSGHVQRSLASNNRRRPQGSQQQRQQRQNAIKKAS-------------IETHMEKREIEVQVSELRDRLEEEETLSEEQIDKKCEALRAKLTNEWQ111
Created with Raphaël 2.2.0

CLF1 Q12309 UniProtKBInterPro

Q12309
5lj3.T
Q12309
5lj3.T
Q12309
5lj3.T
ILDLEELREYQRRKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWEAAQQEYERSSAL266
ILDLEELREYQRRKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWEAAQQEYERSSAL266
YQIAIEKWPSNQLLKAGLLDFEKQFGDINSIEETISYKRKMEYETILSNNAYDYDTWWLYLDLISESFPKQIMQTFEKAIVDSRPKELSKNVQWKRYIYLWMRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTI496
YQVAIEK---NQLLKAGLLDFEKQF---NSIEETISYKRKMDYETILSN----YDTWWLYLDLISE-FPKQIMQTFEKAIVDS------KNVQWKRYIYLWMRYICYVELE---SLLEEELFQRLIDDI-------FSKIWLMYAKFLIR--DVPKARKILGKAIG------TFKGYIELEVKL-EFDRVRKIYEKFIEFQ--DLQIWSQYGELEEN-GDWDRVRGIYTI496
ALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEFAMYQT556
ALDE------KEAKIVLLQKYITFE--------ARKLYRRYLELN---PQSWIEFAMYQT556
Created with Raphaël 2.2.0

SYF1 Q04048 UniProtKBInterPro

Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
Q04048
5lj3.U
DEDVAFEYEIQKTPQNILTWKRYIEYWKEEGRTDKQIRWLYERFCSQFVTDTSIWEDYIRWESTKEVVETSRIFWLFQRCLKSCVRDCDRICLSY115
DEDVAFEYEIQKTPQNILTWKRYIEYWK-----DKQIRWLYERFCSQFVTDTSIWEDYIRWES-----ETSRIFWLFQRCLKSCVRDCDRICLSY115
LELAIEQYDLAMIRHALASSLMKMEREMHRKVWDPVIKFVEEKVLPLTQLDSTQEDEEESTDEAELINVLLVKGFTKGGFISEEISENGSRGDIW210
LELAIE-----MIRHALASSLMKME--MHRKVWDPVIKFVEEKV--------------ESTDEAELINVLLVKGFT-----------------IW210
SSHILERYLKVAPQQKRNESLATLALTRDNITIKSVYEKYLPQDENSGKYLPSSELPFELNFNYLASLEKLGLDNQYEEFMRQMNGIYPDKWLFL305
SSHILERY-----QQKRNESLATLALTR-NITIKSVYEKYL------------------LNFNYLASLEKLG-DNQYEEFMRQMNG--PDKWLFL305
ILSLAKYYISRGRLDSCGDLLKKSLQQTLRYSDFDRIYNFYLLFEQECSQFILGKLKENDSKFFNQKDWTEKLQAHMATFESLINLYDIYLNDVA400
ILSLAKYYI--GRLDSCGDLLKKSLQQ------FDRIYNFYLLFEQECSQFILGKLKEND-------DWTEKLQAHMATFESLINLYDIYLNDVA400
LRQDSNLVETWMKRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARELWTQSLKVPYPYIEDLEEIYLNWADRE495
LRQDS-LVETWMKRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARKLWTQSLKVPYPYIEDLEEIYLNWADRE495
LDKEGVERAFSILEDALHVPTNPEILLEKYKNGHRKIPAQTVLFNSLRIWSKYIDYLEAYCPKDANSSDKIFNKTKMAYNTVIDLRLITPAMAEN590
LD---------------HVPTNPEILL------------------SLRIWSKYIDYLEAY----------IFNKTKMAYNTVIDLR---PAMAEN590
FALFLQNHYEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSHQLSSLSPEHIRFLFEKALKNLCSNGIDCKTIFIAYSVFEERISGLISKSIE685
FALFLQN-YEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSH------PEHIRFLFEKALKNLCSNGIDCKTIFIAYSVFEER-----SKSIE685
ILRRGAVIGTVSVSTHLESRLQLWRMCISKAESTLGPSVTRELYQECIQILPNSKAVEFVIKFSDFESSIGETIRAREILAYGAKLLPPSRNTEL780
ILRRGAVIG-------LESRLQLWRMCISKAES-----VTRELYQECIQIL------EFVIKFSDFES------RAREILAYGAKL-----NTEL780
WDSFEIFELK790
WDSFEIFELK790
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein-associated protein B P40018 UniProtKBInterPro

Toggle Identical (V4)
P40018
5lj3.(V4)
5lj3.4
IQVAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGTTLNIKVEKRVLGLTILRGEQILSTVVEDKPL102
IQVAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPK-------------------IKVEKRVLGLTILRGEQILSTVVEDKPL102
IQVAHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPK-------------------IKVEKRVLGLTILRGEQILSTVVEDKPL102
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein Sm D3 P43321 UniProtKBInterPro

Toggle Identical (W7)
P43321
5lj3.(W7)
5lj3.7
NGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK85
NGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK85
NGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK85
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein E Q12330 UniProtKBInterPro

Toggle Identical (X8)
Q12330
5lj3.(X8)
5lj3.8
Q12330
5lj3.(X8)
5lj3.8
MVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITL89
MVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNS--------KGTPLGKILLKGDNITL89
MVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNS--------KGTPLGKILLKGDNITL89
ITS92
ITS92
ITS92
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein F P54999 UniProtKBInterPro

Toggle Identical (Y9)
P54999
5lj3.(Y9)
5lj3.9
PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIRE83
PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIRE83
PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIRE83
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein G P40204 UniProtKBInterPro

Toggle Identical (Za)
P40204
5lj3.(Za)
5lj3.a
VSTPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVIRGNSIISLEALDA76
VSTPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI------NNHQLGLQTVIRGNSIISLEALDA76
VSTPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI------NNHQLGLQTVIRGNSIISLEALDA76
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein Sm D1 Q02260 UniProtKBInterPro

Q02260
5lj3.0
5lj3.5
Q02260
5lj3.0
5lj3.5
MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPTASDNIA80
MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP---------------------------SDNIA80
MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP---------------------------SDNIA80
SLQYINIRGNTIRQIILPDSLNLDSLLVD109
SLQYINIRGNTIRQIILPDSLNLDSLLVD109
SLQYINIRGNTIRQIILPDSLNLDSL---106
Created with Raphaël 2.2.0

Small nuclear ribonucleoprotein Sm D2 Q06217 UniProtKBInterPro

Toggle Identical (16)
Q06217
5lj3.(16)
5lj3.6
RAELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTP108
RAELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTP108
RAELEELEEFEFKHGPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIVVLKTP108
Created with Raphaël 2.2.0

U2 small nuclear ribonucleoprotein A' Q08963 UniProtKBInterPro

Q08963
5lj3.2
Q08963
5lj3.2
Q08963
5lj3.2
MKFTPSIVIDAPQYYVDHFNGKYNVDKCVILRDLQLETDSESMPSSLKHLTKPTHILDLTNNDLIMIPDLSRRDDIHTLL80
MKFTPSIVIDAPQYYVDHFNGKYNVDKCVILRDLQLETDSESMPSSLKHL---THILDLTNNDLIMIPDLSRRDDIHTLL80
LGRNNIVEVDGRLLPMNVQNLTLSNNSIRRFEDLQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVT160
LGRNNIVEVDGRLLPMNVQNLTLSNNSIRRFEDLQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVT160
AEERKSA167
AEERKSA167
Created with Raphaël 2.2.0

U2 small nuclear ribonucleoprotein B'' P40567 UniProtKBInterPro

P40567
5lj3.3
NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL111
NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL111
Created with Raphaël 2.2.0

unknown

Target
5lj3.b
Target
5lj3.b
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX105
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX105
XXXXXXXXXXXXXXXXXXXXXXXXXXX132
XXXXXXXXXXXXXXXXXXXXXXXXXXX132
Created with Raphaël 2.2.0
5LJ3: Electron Microscopy, 3.80Å. "Structure of the core of the yeast spliceosome immediately after branching". Released 2016-08-03.
2 × MAGNESIUM ION
7 × ZINC ION
1 × GUANOSINE-5'-TRIPHOSPHATE