Q08499 | SWISS-MODEL Repository

Q08499 (PDE4D_HUMAN) Homo sapiens (Human)

3',5'-cyclic-AMP phosphodiesterase 4D UniProtKB InterPro STRING Interactive Modelling

809 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; Isoform 12); 1 identical sequence: Homo sapiens: A0A140VJR0

Available Structures

112 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
crystal structure of PDE4D catalytic domain and zardaverine complex	1mkd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-6-mer	388-715	99.69	6×ZN; 6×MG; 6×ZAR;
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PDE4 complexed with inhibitor	4wcu PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	387-738	100.0	4×3KQ; 4×ZN; 4×MG;
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Crystal structure of PDE4D2 in complex with inhibitor LEO39652	6zba PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	4×QDT; 28×EDO; 4×DMS; 4×MG; 4×ZN;
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Crystal structure of PDE4D in complex with L-869298	2fm0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	4×ZN; 4×MG; 4×M98;
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Crystal structure of PDE4D2 in complex with (R,S)-rolipram	1oyn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	8×ZN; 4×ROL;
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Crystal structure of PDE4D2 in complex with inhibitor L-869299	2fm5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	4×ZN; 4×MG; 4×M99;
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Structure of PDE4D2-IBMX	1zkn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	4×ZN; 4×MG; 4×IBM;
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The Crystal Structure of AMP-Bound PDE4 Suggests a Mechanism for Phosphodiesterase Catalysis	1ptw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	8×ZN; 4×AMP;
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Three dimensional structures of PDE4D in complex with roliprams and implication on inhibitor select…	1q9m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-4-mer	381-714	100	8×ZN; 4×ROL;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-42a	7b9h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	382-714	100	2×ZN; 8×MG; 28×EDO; 2×T3K;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-41b	7ay6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	382-714	100	2×S8Q; 2×ZN; 8×MG; 14×EDO;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-18a	6f8w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	383-714	100	2×ZN; 5×MG; 2×D0E;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-32a	6fdc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	385-714	100	2×ZN; 5×MG; 2×EDO; 1×DD5; 1×D5N;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-4a	6f8t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	386-714	100	2×ZN; 5×MG; 2×CZT;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-7b	6f6u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	386-714	100	3×MG; 2×ZN; 2×CV8; 2×GOL;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-18b	6f8v PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	387-714	100	2×ZN; 4×MG; 2×D0B;
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Crystal structure of PDE4D catalytic domain in complex with arctigenin	6lrm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-714	100	2×ZN; 2×MG; 2×EQC; 26×EDO;
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Structure of the PDE4D-cAMP complex	2pw3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-714	99.69	2×ZN; 2×CMP;
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Crystal structure of PDE4D2 in complex with inhibitor NPV	2qyn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-714	100	2×NPV; 2×ZN; 2×MG;
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Crystal structure of PDE4D catalytic domain in complex with Apremilast	7cbq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-714	100	3×MG; 2×ZN; 11×EDO; 2×A9L;
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The structure of the catalytic domain of human PDE4d with 4-(3-Butoxy-4-methoxyphenyl)methyl-2-imid…	3k4s PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-714	100	2×ZN; 2×0MO; 2×MG;
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Crystal structure of PDE4D catalytic domain complexed with compound 21d	7xaa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-714	100	2×ZN; 2×MG; 2×AQL;
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Crystal structure of PDE4D catalytic domain in complex with compound 36	7cbj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-713	100	2×ZN; 2×MG; 2×FTX; 12×EDO;
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Crystal structure of PDE4D complexed with benzbromarone	8k4h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-713	100	2×ZN; 2×MG; 2×R75; 2×EDO;
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Crystal structure of PDE4D complexed with ethaverine hydrochloride	8k4c PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-713	100	2×VIC; 2×MG; 2×ZN; 1×EDO;
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The crystal structure of PDE4D with Amentoflavone	8ylc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-713	100	2×ZN; 2×MG; 2×A1D6Q;
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Crystal structure of PDE4D complexed with a novel inhibitor	6imi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	389-713	100	3×MG; 2×ZN; 2×AH6; 11×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6imd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	389-713	100	2×ZN; 4×MG; 2×AH9; 11×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6imr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	389-713	100	2×ZN; 2×MG; 2×AJX; 14×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6im6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	389-713	100	2×ZN; 4×MG; 2×AH3; 13×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6ind PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	389-713	100	2×AKO; 3×MG; 2×ZN; 5×EDO;
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PDE4D complexed with inhibitor	4w1o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	389-713	100.0	2×3GJ; 4×ZN;
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Crystal structure of PDE4D complexed with a novel inhibitor	6imt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×ZN; 2×MG; 10×EDO; 2×AK0;
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Crystal structure of PDE4D complexed with a novel inhibitor	6imb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×ZN; 4×MG; 2×AH9; 15×EDO;
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Crystal structure of PDE4D complexed with CX-4945	8w4q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×MG; 2×ZN; 2×3NG; 6×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6imo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×ZN; 3×MG; 2×AJL; 12×EDO;
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Crystal structure of PDE4D complexed with 7b-1	8wdn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×MG; 2×ZN; 2×W8E; 4×EDO;
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Crystal structure of PDE4D complexed with DCN	8wdo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×MG; 2×ZN; 2×W8O; 3×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6ink PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×ZN; 2×MG; 2×AKU; 4×EDO;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-26g	6f8x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	392-715	100	2×ZN; 4×MG; 2×D08; 2×EDO; 1×DMS;
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PDE4D crystal structure in complex with small molecule inhibitor	5k32 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100.0	2×ZN; 2×MG; 2×6Q2; 32×EDO;
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Crystal structure of PDE4D complexed with a novel inhibitor	6inm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-713	100	2×ZN; 2×MG; 2×AKU; 1×EDO;
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Crystal structure of human phosphodiesterase 4d (PDE4d) with papaverine.	3iak PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	388-711	100	2×ZN; 2×MG; 2×EV1;
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Crystal structure of PDE4D complexed with CVT-313	8w4r PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-712	100	2×AJR; 2×MG; 2×ZN; 8×EDO;
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Crystal structure of PDE4D complexed with glycyrrhisoflavone	7yqf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-712	100	2×ZN; 2×MG; 2×JN0; 5×EDO;
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Crystal structure of PDE4D complexed with licoisoflavone A	7ysx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-712	100	2×ZN; 2×MG; 2×JU3; 5×EDO;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-54	6f8r PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	392-714	100	2×CZK; 4×MG; 2×ZN; 1×EDO;
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Crystal structure of PDE4D catalytic domain complexed with compound 22d	7xab PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-712	100	2×ZN; 2×MG; 2×AWI;
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Crystal structure of the PDE4D catalytic domain in complex with GEBR-20b	6f8u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	392-714	100	2×ZN; 5×MG; 3×CZQ;
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Crystal structure of PDE4D catalytic domain complexed with compound 23a	7xbb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	390-712	100	2×ZN; 2×MG; 2×B6V;
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Crystal Structure of the PDE4D Catalytic Domain and UCR2 Regulatory Helix with T-48	6njh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	326-718	100.0	1×ZN; 2×MG; 1×KRD;
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Crystal Structure of the PDE4D Catalytic Domain and UCR2 Regulatory Helix with BPN14770	6njj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	326-718	100.0	2×ZN; 1×MG; 1×KR7; 1×BTB; 1×SO4; 1×EDO;
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Crystal Structure of the PDE4D Catalytic Domain and UCR2 Regulatory Helix with T-49	6nji PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	326-718	100.0	1×ZN; 1×MG; 1×KR4;
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Crystal structure of human phosphodiesterase 4D with bound allosteric modulator	3iad PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	326-714	100.0	1×15X; 1×ZN; 1×MG; 1×EPE;
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Crystal structure of human phosphodiesterase 4d with regulatory domain and d155871	3g4g PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	327-714	100.0	1×ZN; 1×MG; 1×CA; 1×D71;
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Crystal Structure of the PDE4D Catalytic Domain and UCR2 Regulatory Helix with BPN5004	6boj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-734	100.0	2×ZN; 1×MG; 1×E31; 1×CL;
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Crystal structure of human phosphodiesterase 4d with d155988/pmnpq	3g58 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	380-714	100	1×ZN; 1×MG; 1×SO4; 1×988; 4×EDO;
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Crystal structure of PDE4D catalytic domain complexed with Selaginpulvilins K	5wqa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	381-714	100	1×J20; 1×ZN; 1×MG;
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Crystal structure of human phosphodiesterase 4d with d155871	3g4i PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-714	100	1×ZN; 1×MG; 1×SO4; 1×D71; 3×EOH;
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Crystal structure of the catalytic domain of PDE4D2 with (S)-N-(3-{1-[1-(3-Cyclopropylmethoxy-4-dif…	3v9b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-714	100	1×IHM; 2×ZN;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-048	6ftw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	383-713	100	1×ZN; 1×MG; 13×EDO; 1×EPE; 1×E6Z;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-617	7aag PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 2×MG; 1×QWT; 15×EDO; 1×PEG; 5×DMS; 1×EPE;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-769	7abe PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 19×EDO; 1×J2E; 1×EPE;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-226	6fdi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 21×EDO; 1×PEG; 1×D5T;
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Crystal structure of human phosphodiesterase 4d with rolipram	3g4k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 1×SO4; 1×ROL; 8×EDO;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-356	6fe7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 15×EDO; 6×PEG; 1×D62; 1×EPE;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-656	7ab9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 10×EDO; 1×QWZ;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-001	5lbo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 8×EDO; 2×DTT; 1×6M5;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-768	7abd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	384-713	100	1×ZN; 1×MG; 7×EDO; 1×EPE; 1×RLW;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-007	6fw3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 20×EDO; 1×PEG; 1×EPE; 1×E8H;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1439	6fet PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 19×EDO; 1×PEG; 1×D68; 1×EPE; 1×NI;
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Crystal structure of the catalytic domain of PDE4D2 with compound 10D	3sl4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	2×ZN; 16×EDO; 2×DMS; 1×PEG; 1×PO4; 1×JN4;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-637	6iag PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 10×EDO; 1×E3Q;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-053	6rcw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 12×EDO; 1×PEG; 1×DTT;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-425	6ft0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 9×EDO; 1×E6E; 1×EPE;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1361	7abj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 13×EDO; 1×DMS; 1×863; 1×EPE;
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CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 4D IN COMPLEX WITH A TETRAFLUORANLINE COMPOUND	5tkb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	386-714	100.0	1×ZN; 1×MG; 1×SO4; 3×EOH; 1×7DJ;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-635	7a9v PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 9×EDO; 1×EPE;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-654	7a8q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 9×EDO; 1×EPE;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-417	6ibf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 9×EDO; 1×EPE; 1×4I7;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-3098	6fta PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100	1×ZN; 1×MG; 7×EDO; 1×E6N; 1×EPE;
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Crystal structure of human phosphodiesterase 4d with roflumilast	3g4l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-713	100.0	1×ZN; 1×MG; 1×SO4; 1×ROF; 3×EDO;
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Crystal structure of the catalytic domain of PDE4D2 with compound 2	4ogb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-712	100	1×2SR; 8×EDO; 1×PEG; 2×ZN; 2×DMS;
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Crystal structure of the catalytic domain of PDE4D2 complexed with compound 10d	3sl5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-712	100	2×ZN; 1×J25; 2×EDO; 1×DMS;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1335	6hwo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-711	100	15×EDO; 2×PEG; 1×ZN; 1×FFZ; 1×MG; 1×EPE;
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Crystal structure of the apo form of the catalytic domain of PDE4D2	3sl3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	385-711	100	17×EDO; 1×PEG; 2×ZN; 1×PO4;
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Crystal structure of PDE4D catalytic domain complexed with compound 1	6kjz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	387-713	100	1×ZN; 1×MG; 1×MKU;
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Crystal structure of the catalytic domain of PDE4D2 with compound 12c	3sl6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	386-712	100	2×ZN; 9×EDO; 1×JN8;
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Crystal structure of the catalytic domain of PDE4D2 with compound 10o	3sl8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	386-712	100	13×EDO; 2×ZN; 1×PEG; 1×JN7;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1-(3-nitro-phenyl)-1H-p…	1y2k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 1×7DE; 18×EDO;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1H-pyrazole-4-carboxyli…	1y2b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 1×DEE; 11×EDO;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With Cilomilast	1xom PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 1×CIO; 9×EDO;
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Crystal structure of PDE4D2 in complex with inhibitor (S_Zl-n-91)	5wh6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×AKJ; 1×ZN; 2×MG;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1-phenyl-1H-pyrazole-4-…	1y2c PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 1×3DE; 10×EDO;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 1-(4-methoxy-phenyl)-3,5-dimethyl-1H…	1y2d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 1×4DE; 12×EDO;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With Piclamilast	1xon PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100.0	1×ZN; 1×MG; 1×PIL; 1×B3P; 20×EDO;
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Crystal structure of the PDE4D2 catalytic domain in complex with inhibitor (R)-Zl-n-91	5wh5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×R91; 1×ZN; 2×MG;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With Roflumilast	1xoq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 12×EDO; 1×ROF;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 1-(4-amino-phenyl)-3,5-dimethyl-1H-p…	1y2e PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-713	100	1×ZN; 1×MG; 1×5DE; 8×EDO;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With AMP	1tb7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	389-713	100.0	1×ZN; 1×MG; 1×AMP; 14×EDO; 1×B3P;
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Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1086	6feb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-714	100	11×EDO; 2×D5Z; 1×MG; 1×ZN; 1×EPE;
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Crystal structure of PDE4D catalytic domain complexed with compound 18d	7f2m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	388-712	100	1×ZN; 1×MG; 1×1GF;
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Crystal structure of the PDE4D catalytic domain in complex with osthole	6akr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-714	100	2×ZN; 1×A0O;
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PDE4 crystal structure in complex with small molecule inhibitor	5k1i PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	389-713	100.0	1×6PT; 1×ZN; 1×MG;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With Zardaverine	1xor PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-713	100.0	1×ZN; 1×MG; 1×ZAR;
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Catalytic Domain Of Human Phosphodiesterase 4D In Complex With Rolipram	1tbb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-713	100.0	1×ZN; 1×MG; 1×ROL; 5×EDO;
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Crystal structure of PDE4D catalytic domain complexed with 33a	7w4y PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-713	100	1×ZN; 1×MG; 1×8GO;
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Crystal structure of PDE4D catalytic domain complexed with 17	7w4x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-713	100	1×ZN; 1×MG; 1×8G7;
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Crystal structure of PDE4D catalytic domain complexed with compound 4e	6kk0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-712	100	1×M36; 1×ZN; 1×MG;
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Crystal structure of PDE4D catalytic domain complexed with compound 17a	7f2k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-711	100	1×ZN; 1×MG; 1×0X8;
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Crystal structure of PDE4D catalytic domain complexed with compound 18a	7f2l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	393-712	100	1×ZN; 1×MG; 1×1AS;
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The structure of the RACK1 interaction sites located within the unique N-terminal region of the cAM…	1e9k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	250-280	29.03
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	4wzi.1.A	homo-2-mer	0.76	223-713	2×ZN;	79.22
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

13 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	4wzi.1.A	homo-2-mer	0.76	87-577	2×ZN;	79.22
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Isoform 3	4wzi.1.A	homo-2-mer	0.76	18-508	2×ZN;	78.76
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Isoform 4	4wzi.1.A	homo-2-mer	0.78	45-488	2×ZN;	80.68
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Isoform 5	4wzi.1.A	homo-2-mer	0.80	1-411	2×ZN;	82.51
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Isoform 6	4wzi.1.A	homo-2-mer	0.76	159-649	2×ZN;	79.22
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Isoform 6	1e9k.1.A	monomer	0.60	12-49		100.00
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Isoform 7	1e9k.1.A	monomer	0.65	12-49		100.00
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Isoform 8	4wzi.1.A	homo-2-mer	0.80	16-422	2×ZN;	80.43
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Isoform 9	4wzi.1.A	homo-2-mer	0.76	101-591	2×ZN;	80.67
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Isoform 9	4rxo.2.A	homo-2-mer	0.50	305-393		22.37
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Isoform 10	4wzi.1.A	homo-2-mer	0.76	93-583	2×ZN;	79.22
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Isoform 11	4wzi.1.A	homo-2-mer	0.75	162-652	2×ZN;	79.22
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Isoform 12	1e9k.1.A	monomer	0.64	12-49		100.00
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Q08499 (PDE4D_HUMAN) Homo sapiens (Human)

3',5'-cyclic-AMP phosphodiesterase 4D UniProtKBInterProSTRINGInteractive Modelling

Available Structures

112 Experimental Structures

1 SWISS-MODEL model

13 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

3',5'-cyclic-AMP phosphodiesterase 4D UniProtKB InterPro STRING Interactive Modelling