Q56404 | SWISS-MODEL Repository

Q56404 (VATB_THET8) Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)

V-type ATP synthase beta chain UniProtKB InterPro Interactive Modelling

478 aa; Sequence (Fasta) ; 2 identical sequences: Thermus thermophilus: A0A510HRS9, Q72J73

It is possible new templates exist for this target since these models were created.

Available Structures

41 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
2 ATP-bound V1EG of V/A-ATPase from Thermus thermophilus	8gxw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×SO4; 2×ATP; 1×MG;
Assess
V1EG of V/A-ATPase from Thermus thermophilus, state1-1	7vai SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474
Assess
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state1-1	7val SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×PO4; 2×ATP;
Assess
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-2	7vap SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×PO4; 2×ATP;
Assess
1 ATP-bound V1EG of V/A-ATPase from Thermus thermophilus	8gxu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	2×SO4; 1×ATP;
Assess
Nucleotide-free V1EG domain of V/A-ATPase from Thermus thermophilus, state1-2	7vaj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474
Assess
3 nucleotide-bound V1EG of V/A-ATPase from Thermus thermophilus.	8gxx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 2×ATP;
Assess
1 sulfate and 1 ATP bound V1EG of V/A-ATPase from Thermus thermophilus.	8gxz SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×SO4; 1×ATP; 1×MG;
Assess
V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state3	7vb0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	2×MG; 1×ADP; 2×AGS;
Assess
V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state2	7vay SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	2×MG; 1×ADP; 2×AGS;
Assess
V1EG domain of V/A-ATPase from Thermus thermophilus at low ATP concentration, state1-2	7vas SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×ATP;
Assess
V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state1-1	7vaw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	2×MG; 1×ADP; 2×AGS;
Assess
V1EG of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state1-2	7vax SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	2×MG; 1×ADP; 2×AGS;
Assess
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-1	7van SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×PO4; 2×ATP;
Assess
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state3-2	7vaq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×PO4; 2×ATP;
Assess
V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-2	7vau SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×ATP;
Assess
V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state3	7vav SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×ATP;
Assess
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-2	7vao SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×PO4; 2×ATP;
Assess
V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-1	7vat SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×ATP;
Assess
2 sulfate-bound V1EG of V/A-ATPase from Thermus thermophilus.	8gxy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	2×SO4;
Assess
Nucleotide-free V1EG domain of V/A-ATPase from Thermus thermophilus, state2	7vak SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474
Assess
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state1-2	7vam SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×PO4; 2×ATP;
Assess
V1EG domain of V/A-ATPase from Thermus thermophilus at low ATP concentration, state1-1	7var SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74903; Q56403; Q5SIT5;	2-474	1×ADP; 2×MG; 1×ATP;
Assess
Thermus thermophilus V/A-type ATPase/synthase, rotational state 1	6qum SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	3-474	1×MG; 2×ADP;
Assess
Thermus thermophilus V/A-type ATPase/synthase, rotational state 2	6r0w SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	3-466	1×MG; 2×ADP;
Assess
Thermus thermophilus V/A-type ATPase/synthase, rotational state 3	6r0y SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	4-466	1×MG; 2×ADP;
Assess
Thermus thermophilus V/A-type ATPase/synthase, rotational state 1L	6r0z SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	3-464	1×MG; 2×ADP;
Assess
Crystal Structure of the A3B3 complex from V-ATPase	3gqb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q56403;	5-464
Assess
Thermus thermophilus V/A-type ATPase/synthase, rotational state 1R	6r10 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	5-464	1×MG; 2×ADP;
Assess
V/A-ATPase from Thermus thermophilus, the soluble domain, including V1, d, two EG stalks, and N-ter…	6ly8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74903; Q56403;	5-463	1×ADP;
Assess
V/A-type ATPase/synthase from Thermus thermophilus, peripheral domain, rotational state 1	5y5y SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5;	5-463	2×ADP;
Assess
V/A-type ATPase/synthase from Thermus thermophilus, rotational state 3.	5y60 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	5-463	2×ADP;
Assess
V/A-type ATPase/synthase from Thermus thermophilus, rotational state 2	5y5z SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	5-463	2×ADP;
Assess
V/A-type ATPase/synthase from Thermus thermophilus, rotational state 1	5y5x SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	5-463	2×ADP;
Assess
Crystal structure of V1-ATPase at 3.9 angstrom resolution	3w3a SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74903; Q56403;	7-463	2×ADP;
Assess
Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic …	3a5c SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74903; Q56403;	7-463	2×ADP;
Assess
Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic …	3a5d SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74903; Q56403;	7-463
Assess
Thermus thermophilus V/A-ATPase, conformation 2	5gas SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer H9ZQR4; O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT7;	7-463
Assess
Thermus thermophilus V/A-ATPase bound to VH dAbs	5tsj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT6; Q5SIT7;	7-463
Assess
Fitted atomic models of Thermus thermophilus V-ATPase subunits into cryo-EM map	3j0j SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O87880; P74901; P74902; P74903; Q56403; Q5SIT5;	7-463	2×ADP;
Assess
Thermus thermophilus V/A-ATPase, conformation 1	5gar SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer H9ZQR4; O87880; P74901; P74902; P74903; Q56403; Q5SIT5; Q5SIT7;	7-463
Assess

1 SWISS-MODEL model

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7vay.1.F	monomer	0.84	2-472		100.00
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Q56404 (VATB_THET8) Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)

V-type ATP synthase beta chain UniProtKBInterProInteractive Modelling

Available Structures

41 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

V-type ATP synthase beta chain UniProtKB InterPro Interactive Modelling