Q5EG65 (POLG_HCVGL) Hepatitis C virus (isolate Glasgow) (HCV)
Genome polyprotein UniProtKBInterProInteractive Modelling
829 aa; Sequence (Fasta)
Molecule Processing
| Core protein p21 | |
| Core protein p19 | |
| Envelope glycoprotein E1 | |
| Envelope glycoprotein E2 | |
| p7 | |
| Protease NS2-3 |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 169-189 | Helical | ||
| 359-379 | Helical | ||
| 726-746 | Helical | ||
| 758-778 | Helical | ||
| 783-803 | Helical | ||
| 814-829 | Helical | ||
| 177-178 | Cleavage; by host signal peptidase | ||
| 191-192 | Cleavage; by host signal peptidase | ||
| 383-384 | Cleavage; by host signal peptidase | ||
| 746-747 | Cleavage; by host signal peptidase | ||
| 809-810 | Cleavage; by host signal peptidase | ||
| 2-115 | Hepatitis C virus core protein, N-terminal IPR002522PF01543 | ||
| 116-190 | Hepatitis C virus core protein, C-terminal IPR002521PF01542 | ||
| 193-382 | Hepatitis C virus envelope glycoprotein E1 IPR002519PF01539 | ||
| 386-729 | Hepatitis C virus non-structural protein E2/NS1 IPR002531PF01560 |
Sequence Alignments
Core protein p21 2-191; PRO_0000037559
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Download | Assess |
|---|---|---|---|---|---|---|---|
| monomer | -5.11 | 1cwx.1.A | 100.00 | ||||
| monomer | -6.34 | 1xct.1.A | 100.00 |
Core protein p19 2-177; PRO_0000037560
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Download | Assess |
|---|---|---|---|---|---|---|---|
| monomer | -5.11 | 1cwx.1.A | 100.00 | ||||
| monomer | -6.34 | 1xct.1.A | 100.00 |
Envelope glycoprotein E1 192-383; PRO_0000037562
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Download | Assess |
|---|---|---|---|---|---|---|---|
| monomer | -1.07 | 4uoi.3.B | 92.41 | ||||
| monomer | -3.20 | 2knu.1.A | 96.55 |
Envelope glycoprotein E2 384-746; PRO_0000037563
| Description | Oligo-state | Ligands | Structure | Range | Download | Assess |
|---|---|---|---|---|---|---|
| Structure of the broadly neutralizing antibody AP33 in complex with its HCV epitope (E2 residues 41… |
Heteromer | 2×GOL; | 4gag | |||
| The antigen-binding fragment of MAb24 in complex with a peptide from Hepatitis C Virus E2 epitope I… |
Heteromer | 11×GOL; | 5vxr |
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Download | Assess |
|---|---|---|---|---|---|---|---|
| monomer | 1×NAG; | -2.44 | 6mej.1.C | 83.21 | |||
| monomer | -2.88 | 2kzq.1.A | 61.11 |
p7 747-809; PRO_0000037564
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Download | Assess |
|---|---|---|---|---|---|---|---|
| monomer | -3.89 | 3zd0.1.A | 76.19 | ||||
| monomer | -3.26 | 2mts.1.A | 69.39 | ||||
| monomer | -6.32 | 2m6x.1.A | 50.00 |