Q8NHM5 (KDM2B_HUMAN) Homo sapiens (Human)

Lysine-specific demethylase 2B UniProtKBInterProSTRINGInteractive Modelling

1336 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; )

Sequence Features

 242Iron; catalytic.
 244Iron; catalytic.
 314Iron; catalytic.
 613Zinc.
 616Zinc.
 619Zinc.
 624Zinc.
 627Zinc.
 630Zinc.
 646Zinc.
 651Zinc.
 662Zinc.
 665Zinc.
 688Zinc.
 691Zinc.
 696Zinc.
 699Zinc.
 719Zinc.
 722Zinc.
 606-652CXXC-type.
 659-725PHD-type.
 141-318Cupin-like domain 8
IPR041667PF13621
 334-378Jumonji, helical domain
IPR041070PF17811
 607-651Zinc finger, CXXC-type
IPR002857PF02008
 656-722Zinc finger, PHD-finger
IPR019787PF16866
 1051-1106F-box domain
IPR001810PF00646

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Structural Basis for the Hierarchical Assembly of the Core of PRC1.1 Heteromer
P63208; Q5H9F3; Q9BSM1;
5jh51065-1335
Ubiquitin Variant (UbV.Fl10.1) bound to a human Skp1-Fbl10 fragment complex. Heteromer
P0CG47; P63208;
6bva1064-1103
Zinc fingers of KDM2Bmonomer UNX;ZN;4o64608-723

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer AKG;FE2;-2.522yu1.1.A66-573
68.44

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
3monomer-1.585jh5.1.A1053-1325
100.00
4monomer-1.225jh5.1.A996-1250
100.00
2monomer-1.265jh5.1.A1068-1279
100.00
2monomerAKG;FE2;-2.542yu1.1.A66-573
68.29
3monomerAKG;FE2;-2.542yu1.1.A66-573
68.44
4monomerAKG;FE2;-2.552yu1.1.A35-542
69.35
5monomerAKG;FE2;-3.902yu1.1.A1-456
72.25
2monomerZN;-1.034o64.1.A608-723
100.00