Q8TDD1 | SWISS-MODEL Repository

Q8TDD1 (DDX54_HUMAN) Homo sapiens (Human)

ATP-dependent RNA helicase DDX54 UniProtKB InterPro STRING Interactive Modelling

881 aa; Sequence (Fasta) ; (Isoform 2)

It is possible new templates exist for this target since these models were created.

Available Structures

6 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Human nucleolar pre-60S ribosomal subunit (State D1)	8fkv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P36578; P39023; P40429; P42766; P46087; P46776; P46778; P50914; P56182; P56537; P61254; P61313; P61927; P62424; P62750; P62829; P62899; P62906; P62910; Q02543; Q02878; Q07020; Q14137; Q15050; Q6DKI1; Q6RFH5; Q8IY81; Q8TDN6; Q8WTT2; Q99848; Q9BRT6; Q9BVP2; Q9BXY0; Q9BYG3; Q9BZE4; Q9H9Y2; Q9NVP1; Q9UHA3; Q9UKD2; Q9Y221; Q9Y3C1; Q9Y3T9; Q9Y3U8;	43-845	100.0	65×MG; 2×ZN; 1×ADP; 1×SF4; 1×GDP; 1×K;
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	Human nucleolar pre-60S ribosomal subunit (State D2)	8fkw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P36578; P39023; P40429; P42766; P46087; P46776; P46778; P46779; P50914; P56537; P61254; P61313; P61927; P62424; P62750; P62829; P62899; P62906; P62910; Q02543; Q02878; Q07020; Q14137; Q15050; Q6DKI1; Q8IY81; Q8TDN6; Q8WTT2; Q99848; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9NVP1; Q9UHA3; Q9UKD2; Q9Y221; Q9Y3C1; Q9Y3T9; Q9Y3U8;	43-845	100.0	59×MG; 2×ZN; 1×ADP; 1×GDP; 1×K;
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	Human nucleolar pre-60S ribosomal subunit (State E)	8fkx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P36578; P39023; P40429; P42766; P46087; P46776; P46778; P46779; P50914; P56537; P61254; P61313; P61927; P62424; P62750; P62829; P62899; P62906; P62910; Q02543; Q02878; Q07020; Q14137; Q15050; Q6DKI1; Q8IY81; Q8TDN6; Q8WTT2; Q99848; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9NVP1; Q9UHA3; Q9UKD2; Q9Y221; Q9Y3C1; Q9Y3T9; Q9Y3U8;	43-775	100.0	61×MG; 2×ZN; 1×ADP; 1×GDP; 1×K;
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	Human nucleolar pre-60S ribosomal subunit (State F)	8fky PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P36578; P39023; P40429; P42766; P46087; P46776; P46778; P46779; P49207; P50914; P56537; P61254; P61313; P61353; P61927; P62424; P62750; P62829; P62888; P62899; P62906; P62910; P84098; Q02543; Q02878; Q07020; Q14137; Q15050; Q6DKI1; Q8IY81; Q8TDN6; Q8WTT2; Q99848; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9GZL7; Q9H6Y2; Q9NVP1; Q9UHA3; Q9UKD2; Q9Y221; Q9Y3C1; Q9Y3T9; Q9Y3U8;	43-775	100.0	70×MG; 3×ZN; 1×ADP; 1×GDP; 1×K;
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	Human nucleolar pre-60S ribosomal subunit (State C1)	8fkt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P36578; P39023; P40429; P42766; P46087; P46776; P46778; P50914; P56182; P56537; P61254; P61313; P61927; P62424; P62750; P62829; P62906; P62910; Q02543; Q02878; Q07020; Q14137; Q15050; Q6DKI1; Q6RFH5; Q8IY81; Q8TDN6; Q99848; Q9BRT6; Q9BVP2; Q9BXY0; Q9BYG3; Q9BZE4; Q9H9Y2; Q9NVP1; Q9UHA3; Q9UKD2; Q9Y221; Q9Y3C1; Q9Y3U8;	96-775	100.0	64×MG; 2×ZN; 1×ADP; 1×SF4; 1×GDP; 1×K;
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	Human nucleolar pre-60S ribosomal subunit (State C2)	8fku PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P36578; P39023; P40429; P42766; P46087; P46776; P46778; P46779; P50914; P56537; P61254; P61313; P61927; P62424; P62750; P62829; P62906; P62910; Q02543; Q02878; Q07020; Q14137; Q15050; Q6DKI1; Q8IY81; Q8TDN6; Q99848; Q9BRT6; Q9BVP2; Q9BYG3; Q9BZE4; Q9NVP1; Q9UHA3; Q9UKD2; Q9Y221; Q9Y3C1; Q9Y3U8;	96-775	100.0	58×MG; 2×ZN; 1×ADP; 1×GDP; 1×K;
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7 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	8fkt.1.0	monomer	0.83	96-775		100.00
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	6y53.1.D	monomer	0.71	96-457		35.73
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	2j0u.2.A	monomer	0.66	97-463		32.78
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	8arp.1.E	monomer	0.63	65-441	1×MG;	31.90
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	8ark.2.A	monomer	0.62	65-441		31.90
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	8i9x.1.0	monomer	0.61	96-809		41.63
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	8fks.1.j	monomer	0.61	107-544		35.37
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

8 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	8fkt.1.0	monomer	0.83	96-775		99.55
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	Isoform 2	6y53.1.D	monomer	0.71	96-456		35.56
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	Isoform 2	8arp.1.E	monomer	0.63	65-441	1×MG;	31.90
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	Isoform 2	8ark.2.A	monomer	0.62	65-441		31.90
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	Isoform 2	8i9x.1.0	monomer	0.62	96-810		41.24
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	Isoform 2	8fks.1.j	monomer	0.61	107-544		35.37
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	Isoform 2	6x2n.1.A	monomer	0.52	116-606		19.91
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	Isoform 2	6acx.1.B	monomer	0.51	110-604		14.59
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Alignments