Q96HY6 | SWISS-MODEL Repository

Q96HY6 (DDRGK_HUMAN) Homo sapiens (Human)

DDRGK domain-containing protein 1 UniProtKB InterPro STRING Interactive Modelling

314 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

7 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	8oj5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96JB5; Q96L21; Q9Y3U8;	117-304	220×MG; 5×ZN;
Assess
60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	8ohd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96JB5; Q96L21; Q9Y3U8;	117-304	220×MG; 5×ZN;
Assess
UFL1 E3 ligase bound 60S ribosome	8qfc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer A0A8C2YGR4; O94874; P62906; Q96JB5;	120-304
Assess
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	8oj0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer A0A6J3FY29; O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P38377; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96JB5; Q96L21; Q9Y3U8;	196-304	220×MG; 5×ZN;
Assess
UFL1/DDRGK1 bound to UFC1	8c0d SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O94874; Q9Y3C8;	205-306
Assess
Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1	8b9x SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	207-305	1×CL;
Assess
Crystal structure of Ufm1 fused to UFBP1 UFIM	7w3n SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	194-202
Assess

2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
8ohd.1.F	monomer	0.56	117-304		100.00
Assess
7ae1.1.O	monomer	0.53	216-299		9.52
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

1 SWISS-MODEL model built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	8ohd.1.F	monomer	0.64	117-303		88.20
Assess

Alignments