Q96MU7 (YTDC1_HUMAN) Homo sapiens (Human)

YTH domain-containing protein 1 UniProtKBInterProSTRINGInteractive Modelling

727 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

102 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor Y…monomer337-509
100
Crystal structure of YTHDC1 with compound T96monomer345-508
100OWH;SO4;
Crystal structure of YTHDC1 with compound T_96monomer345-508
100OWH;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_234monomer345-508
100OW8;SO4;
Crystal structure of YTHDC1 with compound VVR_DC1_002monomer345-508
100P5H;SO4;
Xist (m6A)UCG tetraloop RNA bound to the YTH domain of YTHDC1monomer345-508
100GTP;EDO;SO4;
YTH Domain of Human YTHDC1 with dsDNA Comprising Single N6mA joined by two six-bp DNA duplexes in P…monomer345-508
100EDO;
YTH Domain of Human YTHDC1 with dsDNA Comprising Single N6mA joined by Two Six-bp DNA Duplexes in P…monomer345-508
100EDO;
Crystal structure of YTHDC1 with compound T96C1monomer345-507
100PJH;SO4;
Crystal structure of YTHDC1 with fragment 15 (DHU_DC1_169)monomer345-507
100.0M5E;SO4;
Crystal structure of YTHDC1 with fragment 11 (DHU_DC1_128)monomer345-507
100.0M4K;SO4;
YTH domain of human YTHDC1monomer345-507
100SO4;EDO;
Crystal structure of YTHDC1 with compound DHU_DC1_135monomer345-507
100P0B;SO4;
Crystal structure of YTHDC1 with compound YLI_DC1_006monomer345-507
100OYT;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_180monomer345-507
100QF2;SO4;
Crystal structure of YTHDC1 in complex with Compound 18 (ZA_312)monomer345-507
100IWF;SO4;
Crystal structure of YTHDC1 with fragment 4 (DHU_DC1_158)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_092monomer345-507
100SO4;
Crystal structure of YTHDC1 in complex with Compound 2b (YL_32)monomer345-507
100IT6;SO4;
Crystal structure of YTHDC1 with compound YLI_DC1_001monomer345-507
100ID0;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_068monomer345-507
100.0P0K;SO4;
Crystal structure of YTHDC1 in complex with Compound 16 (ZA_354)monomer345-507
100.0IWM;SO4;
Crystal structure of YTHDC1 in complex with Compound 12 (ZA_341)monomer345-507
100.0IVR;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_036monomer345-507
100SO4;
Crystal structure of YTHDC1 with fragment 22 (ACA_DC1_001)monomer345-507
100M6W;SO4;
Crystal structure of YTHDC1 in complex with Compound 37 (ZA_356)monomer345-507
100.0JO0;SO4;
Crystal structure of YTHDC1 in complex with Compound 6 (ZA_308)monomer345-507
100.0IUH;SO4;
Crystal structure of YTHDC1 in complex with Compound 36 (ZA_540b)monomer345-507
100JA0;SO4;
Crystal structure of YTHDC1 in complex with Compound 29 (ZA_337)monomer345-507
100JIB;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_139monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_225monomer345-507
100.07RT;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_222monomer345-507
1007RN;SO4;
Crystal structure of YTHDC1 in complex with Compound 8 (CS_01)monomer345-507
100IUZ;SO4;
Crystal structure of YTHDC1 in complex with Compound 4 (ZA_232)monomer345-507
100IU2;SO4;
Crystal structure of YTHDC1 with fragment 21 (DHU_DC1_131)monomer345-507
100.0M5B;SO4;
Crystal structure of YTHDC1 in complex with Compound 5 (ZA_236)monomer345-507
100.0IUA;SO4;
Crystal structure of YTHDC1 in complex with Compound 21 (ZA_515)monomer345-507
100K1O;SO4;
Crystal structure of YTHDC1 in complex with Compound 23 (ZA_385)monomer345-507
100J7L;SO4;
Crystal structure of YTHDC1 in complex with Compound 19 (ZA_347)monomer345-507
100IZJ;SO4;
Crystal structure of YTHDC1 in complex with Compound 26 (ZA_513)monomer345-507
100JIR;SO4;
Crystal structure of YTHDC1 in complex with Compound 22 (ZA_393)monomer345-507
100IYQ;SO4;
Crystal structure of YTHDC1 in complex with Compound 15 (ZA_343)monomer345-507
100IWV;SO4;
Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326)monomer345-507
100JHU;SO4;
Crystal structure of YTHDC1 with fragment 23 (ACA_DC1_005)monomer345-507
100M75;SO4;
Crystal structure of YTHDC1 in complex with Compound 27 (ZA_309)monomer345-507
100SO4;JII;
Crystal structure of YTHDC1 in complex with Compound 25 (ZA_349)monomer345-507
100J9B;SO4;
Crystal structure of YTHDC1 in complex with Compound 13 (ZA_364)monomer345-507
100IW0;SO4;
Crystal structure of YTHDC1 with fragment 27 (DHU_DC1_256)monomer345-507
100.0M4N;
Crystal structure of YTHDC1 with fragment 7 (DHU_DC1_021)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 30 (DHU_DC1_220)monomer345-507
100.0M78;SO4;
The YTH domain of YTHDC1 protein in complex with GGm6AC oligonucleotidemonomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 8 (DHU_DC1_006)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 28 (DHU_DC1_176)monomer345-507
100M6Z;SO4;
The YTH domain of YTHDC1 protein in complex with m6ACU oligonucleotidemonomer345-507
100SO4;
Crystal structure of YTHDC1 with fragment 29 (DHU_DC1_218)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_046monomer345-507
100P0N;SO4;
Crystal structure of YTHDC1 with compound YLI_DC1_002monomer345-507
100OYN;SO4;
Crystal structure of YTHDC1 with compound YLI_DC1_008monomer345-507
1005ZK;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_011monomer345-507
100OWZ;SO4;
Crystal structure of YTHDC1 with fragment 13 (DHU_DC1_153)monomer345-507
100M4B;SO4;
Crystal structure of YTHDC1 with compound YLI_DC1_002monomer345-507
100OYN;SO4;
Crystal structure of YTHDC1 with fragment 17 (DHU_DC1_042)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 18 (DHU_DC1_048)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_085monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_096monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 20 (DHU_DC1_134)monomer345-507
100.0
Crystal structure of YTHDC1 with compound DHU_DC1_078monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 16 (DHU_DC1_017)monomer345-507
100.0SO4;MZY;
Crystal structure of YTHDC1 with fragment 10 (DHU_DC1_076)monomer345-507
100.0M4Q;SO4;
Crystal structure of YTHDC1 apo purified using GST tagmonomer345-507
100PEG;SO4;
Crystal structure of YTHDC1 in complex with Compound 31 (ZA_400)monomer345-507
100JBD;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_038monomer345-507
100SO4;
Crystal structure of YTHDC1 with fragment 3 (DHU_DC1_149)monomer345-507
100.0SO4;
YTH domain of human YTHDC1 with 11mer ssDNA Containing N6mAmonomer345-507
100
Crystal structure of YTHDC1 in complex with Compound 3 (ZA_431)monomer345-507
100ITJ;SO4;
Crystal structure of YTHDC1 in complex with Compound 10 (ZA_294)monomer345-507
100IV6;SO4;
Crystal structure of YTHDC1 with m6Amonomer345-507
100SO4;6MZ;
Crystal structure of YTHDC1 with compound DHU_DC1_125monomer345-507
100.0SO4;OUW;
Crystal structure of YTHDC1 and Y3 complexmonomer345-507
100.0VIM;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_226monomer345-507
1007SL;SO4;
Crystal structure of YTHDC1 in complex with Compound 40 (CS_3a)monomer345-507
100JNC;SO4;
Crystal structure of YTHDC1 with fragment 9 (DHU_DC1_107)monomer345-507
100.0SO4;
Crystal structure of YTHDC1 with compound YLI_DC1_003monomer345-507
100OYK;SO4;
Crystal structure of YTHDC1 with compound ADO_AC_25monomer345-507
100OYK;SO4;
Crystal structure of YTHDC1 in complex with Compound 7 (ZA_560)monomer345-507
100IUQ;SO4;
Crystal structure of YTHDC1 with fragment 14 (ACA_DC1_004)monomer345-507
100M6N;SO4;
Crystal structure of YTHDC1 in complex with Compound 11 (ZA_572)monomer345-507
100IVI;SO4;
Crystal structure of YTHDC1 with compound DHU_DC1_232monomer345-507
1007RI;SO4;
The YTH domain of YTHDC1 protein in complex with Gm6ACU oligonucleotidemonomer345-507
100SO4;
Crystal structure of YTHDC1 with fragment 2 (DHU_DC1_140)monomer345-507
100M0W;SO4;
Crystal structure of YTHDC1 with fragment 24 (PSI_DC1_003)monomer345-507
100.0M4T;SO4;
Crystal structure of YTHDC1 with fragment 12 (DHU_DC1_150)monomer345-507
100.0SO4;
YTH domain of human YTHDC1 with a 10mer Oligo Containing N6mAmonomer345-507
100EDO;SO4;NA;
The crystal structure of an RNA complexmonomer345-507
100UNX;
Crystal structure of YTHDC1 with compound PSI_DC1_002monomer345-507
1007RE;GOL;SO4;
Crystal structure of YTHDC1 with compound PSI_DC1_004monomer345-507
1007RX;SO4;
The crystal structure of an apo RNA binding proteinmonomer345-507
100.0UNX;
Crystal structure of YTHDC1 with fragment 25 (PSI_DC1_005)monomer345-507
100M58;SO4;
Crystal structure of YTHDC1 with fragment 26 (DHU_DC1_198)monomer345-507
100.0M4E;SO4;
Crystal structure of YTHDC1 with fragment 1 (DHU_DC1_141)monomer345-507
100M1E;SO4;
The YTH domain of YTHDC1 protein in complex with Gm6AC oligonucleotidemonomer345-507
100.0SO4;
Crystal structure of YTHDC1 with fragment 19 (DHU_DC1_045)monomer345-507
100.0SO4;

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6szr.1.Amonomer0.82345-507
100.00

1 SWISS-MODEL model built on isoform sequence

IsoformTemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 26zd4.1.Amonomer0.79326-489
97.63