Q96MU7 (YTDC1_HUMAN) Homo sapiens (Human)

YTH domain-containing protein 1 UniProtKBInterProSTRINGInteractive Modelling

727 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

101 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor Y…
2yud
monomer337-509
Assess
Crystal structure of YTHDC1 with compound T_96
6yl0
monomer345-508
1×OWH; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound T96
7pjq
monomer345-508
1×OWH; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_234
6ykz
monomer345-508
1×OW8; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound VVR_DC1_002
6yoq
monomer345-508
1×P5H; 3×SO4;
Assess
Xist (m6A)UCG tetraloop RNA bound to the YTH domain of YTHDC1
7po6
monomer345-508
1×GTP; 4×EDO; 3×SO4;
Assess
YTH Domain of Human YTHDC1 with dsDNA Comprising Single N6mA joined by Two Six-bp DNA Duplexes in P…
7l4y
monomer345-508
1×EDO;
Assess
YTH Domain of Human YTHDC1 with dsDNA Comprising Single N6mA joined by two six-bp DNA duplexes in P…
7l4x
monomer345-508
3×EDO;
Assess
Crystal structure of YTHDC1 with compound T96C1
6ynp
monomer345-507
1×PJH; 4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 15 (DHU_DC1_169)
6t02
monomer345-507
2×M5E; 5×SO4;
Assess
Crystal structure of YTHDC1 with fragment 11 (DHU_DC1_128)
6szx
monomer345-507
1×M4K; 3×SO4;
Assess
YTH domain of human YTHDC1
6we8
monomer345-507
4×SO4; 5×EDO;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_135
6ynn
monomer345-507
1×P0B; 2×SO4;
Assess
Crystal structure of YTHDC1 with compound YLI_DC1_006
7p8b
monomer345-507
1×OYT; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_180
6zcm
monomer345-507
1×QF2; 3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 4 (DHU_DC1_158)
6sz3
monomer345-507
1×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 18 (ZA_312)
8q37
monomer345-507
1×IWF; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound YLI_DC1_001
7p87
monomer345-507
1×ID0; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_068
6ynk
monomer345-507
1×P0K; 3×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 2b (YL_32)
8q2q
monomer345-507
1×IT6; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_092
6yki
monomer345-507
4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 16 (ZA_354)
8q35
monomer345-507
1×IWM; 3×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 12 (ZA_341)
8q31
monomer345-507
1×IVR; 3×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 6 (ZA_308)
8q2u
monomer345-507
1×IUH; 4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 22 (ACA_DC1_001)
6t0x
monomer345-507
1×M6W; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 37 (ZA_356)
8q4v
monomer345-507
1×JO0; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_036
6yni
monomer345-507
4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 36 (ZA_540b)
8q4u
monomer345-507
1×JA0; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_139
6yno
monomer345-507
3×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 29 (ZA_337)
8q4q
monomer345-507
1×JIB; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_225
7pj8
monomer345-507
1×7RT; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_222
7pj7
monomer345-507
1×7RN; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 4 (ZA_232)
8q2s
monomer345-507
1×IU2; 3×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 8 (CS_01)
8q2w
monomer345-507
1×IUZ; 4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 21 (DHU_DC1_131)
6t08
monomer345-507
1×M5B; 2×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 5 (ZA_236)
8q2t
monomer345-507
1×IUA; 3×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 19 (ZA_347)
8q38
monomer345-507
1×IZJ; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 23 (ZA_385)
8q3g
monomer345-507
1×J7L; 2×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 21 (ZA_515)
8q39
monomer345-507
1×K1O; 2×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 26 (ZA_513)
8q4n
monomer345-507
1×JIR; 4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 27 (DHU_DC1_256)
6t0d
monomer345-507
1×M4N;
Assess
Crystal structure of YTHDC1 in complex with Compound 22 (ZA_393)
8q3a
monomer345-507
1×IYQ; 5×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 13 (ZA_364)
8q32
monomer345-507
1×IW0; 2×SO4;
Assess
Crystal structure of YTHDC1 with fragment 23 (ACA_DC1_005)
6t0z
monomer345-507
1×M75; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 15 (ZA_343)
8q33
monomer345-507
1×IWV; 5×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 25 (ZA_349)
8q4m
monomer345-507
1×J9B; 2×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326)
8q4r
monomer345-507
1×JHU; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 27 (ZA_309)
8q4p
monomer345-507
4×SO4; 1×JII;
Assess
Crystal structure of YTHDC1 with fragment 7 (DHU_DC1_021)
6szl
monomer345-507
3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 30 (DHU_DC1_220)
6t12
monomer345-507
1×M78; 2×SO4;
Assess
The YTH domain of YTHDC1 protein in complex with GGm6AC oligonucleotide
6rt6
monomer345-507
1×SO4;
Assess
Crystal structure of YTHDC1 with fragment 8 (DHU_DC1_006)
6szn
monomer345-507
3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 28 (DHU_DC1_176)
6t10
monomer345-507
1×M6Z; 2×SO4;
Assess
Crystal structure of YTHDC1 with fragment 29 (DHU_DC1_218)
6t11
monomer345-507
5×SO4;
Assess
The YTH domain of YTHDC1 protein in complex with m6ACU oligonucleotide
6rt4
monomer345-507
4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 16 (DHU_DC1_017)
6t03
monomer345-507
3×SO4; 1×MZY;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_085
6yl9
monomer345-507
3×SO4;
Assess
Crystal structure of YTHDC1 with compound YLI_DC1_002
6ym8
monomer345-507
1×OYN; 1×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_011
6yl8
monomer345-507
1×OWZ; 4×SO4;
Assess
Crystal structure of YTHDC1 with compound YLI_DC1_008
7p8f
monomer345-507
1×5ZK; 1×SO4;
Assess
Crystal structure of YTHDC1 with fragment 10 (DHU_DC1_076)
6szt
monomer345-507
1×M4Q; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_078
6ynl
monomer345-507
5×SO4;
Assess
Crystal structure of YTHDC1 with compound YLI_DC1_002
7p88
monomer345-507
1×OYN; 1×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_046
6ynj
monomer345-507
2×P0N; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_096
6ynm
monomer345-507
4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 17 (DHU_DC1_042)
6t04
monomer345-507
2×SO4;
Assess
Crystal structure of YTHDC1 with fragment 18 (DHU_DC1_048)
6t05
monomer345-507
2×SO4;
Assess
Crystal structure of YTHDC1 with fragment 13 (DHU_DC1_153)
6t01
monomer345-507
1×M4B; 3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 20 (DHU_DC1_134)
6t07
monomer345-507
Assess
Crystal structure of YTHDC1 apo purified using GST tag
6zd9
monomer345-507
1×PEG; 2×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 31 (ZA_400)
8q4t
monomer345-507
1×JBD; 4×SO4;
Assess
Crystal structure of YTHDC1 with fragment 3 (DHU_DC1_149)
6sz2
monomer345-507
2×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_038
6yke
monomer345-507
6×SO4;
Assess
YTH domain of human YTHDC1 with 11mer ssDNA Containing N6mA
6we9
monomer345-507
Assess
Crystal structure of YTHDC1 with m6A
6zcn
monomer345-507
3×SO4; 1×6MZ;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_125
6ykj
monomer345-507
2×SO4; 1×OUW;
Assess
Crystal structure of YTHDC1 in complex with Compound 3 (ZA_431)
8q2r
monomer345-507
1×ITJ; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 10 (ZA_294)
8q2x
monomer345-507
1×IV6; 3×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_226
7pjp
monomer345-507
1×7SL; 4×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 40 (CS_3a)
8q4w
monomer345-507
1×JNC; 2×SO4;
Assess
Crystal structure of YTHDC1 with fragment 9 (DHU_DC1_107)
6szr
monomer345-507
3×SO4;
Assess
Crystal structure of YTHDC1 with compound ADO_AC_25
6ym2
monomer345-507
1×OYK; 5×SO4;
Assess
Crystal structure of YTHDC1 with compound YLI_DC1_003
7p8a
monomer345-507
1×OYK; 5×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 11 (ZA_572)
8q2y
monomer345-507
1×IVI; 1×SO4;
Assess
Crystal structure of YTHDC1 with fragment 14 (ACA_DC1_004)
6t0o
monomer345-507
1×M6N; 6×SO4;
Assess
Crystal structure of YTHDC1 in complex with Compound 7 (ZA_560)
8q2v
monomer345-507
1×IUQ; 2×SO4;
Assess
Crystal structure of YTHDC1 with compound DHU_DC1_232
7pj9
monomer345-507
1×7RI; 4×SO4;
Assess
The YTH domain of YTHDC1 protein in complex with Gm6ACU oligonucleotide
6rt7
monomer345-507
3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 24 (PSI_DC1_003)
6t09
monomer345-507
1×M4T; 5×SO4;
Assess
Crystal structure of YTHDC1 with fragment 2 (DHU_DC1_140)
6sz1
monomer345-507
1×M0W; 1×SO4;
Assess
Crystal structure of YTHDC1 with fragment 12 (DHU_DC1_150)
6szy
monomer345-507
2×SO4;
Assess
YTH domain of human YTHDC1 with a 10mer Oligo Containing N6mA
6wea
monomer345-507
6×EDO; 6×SO4; 1×NA;
Assess
The crystal structure of an RNA complex
4r3i
monomer345-507
7×UNX;
Assess
Crystal structure of YTHDC1 with compound PSI_DC1_002
7pja
monomer345-507
1×7RE; 2×GOL; 3×SO4;
Assess
The crystal structure of an apo RNA binding protein
4r3h
monomer345-507
5×UNX;
Assess
Crystal structure of YTHDC1 with compound PSI_DC1_004
7pjb
monomer345-507
1×7RX; 3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 25 (PSI_DC1_005)
6t0a
monomer345-507
1×M58; 5×SO4;
Assess
Crystal structure of YTHDC1 with fragment 26 (DHU_DC1_198)
6t0c
monomer345-507
1×M4E; 3×SO4;
Assess
Crystal structure of YTHDC1 with fragment 1 (DHU_DC1_141)
6syz
monomer345-507
1×M1E; 2×SO4;
Assess
The YTH domain of YTHDC1 protein in complex with Gm6AC oligonucleotide
6rt5
monomer345-507
2×SO4;
Assess
Crystal structure of YTHDC1 with fragment 19 (DHU_DC1_045)
6t06
monomer345-507
2×SO4;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6szr.1.Amonomer0.82345-507
100.00
Assess

1 SWISS-MODEL model built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 26zd4.1.Amonomer0.79326-489
97.63
Assess