Q9RXJ5 (RL16_DEIRA) Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)

50S ribosomal protein L16 UniProtKBInterProSTRINGInteractive Modelling

141 aa; Sequence (Fasta) Identical sequences: Deinococcus wulumuqiensis: A0A345IJH4; Deinococcus reticulitermitis: A0A1H7BQP7; Deinococcus wulumuqiensis R12: A0A6G7H750

Sequence Features

Add
 4-132Ribosomal protein L10e/L16
IPR016180PF00252

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSS8; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
198×MG;5dm65-140
Assess
Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
35×MG;2zjr5-140
Assess
Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromy… Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSS8; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
186×MG;HGR;5dm75-140
Assess
Crystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radiodurans Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
35×MG;1F2;4io95-140
Assess
Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
35×MG;1F3;4ioa5-140
Assess
Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the … Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
LMA; 154×MG; 42×NA; 15×K;3pio5-140
Assess
Thiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radiodurans Heteromer
P0C8P8; P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
36×MG;3cf55-140
Assess
Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RST0; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
2zjq5-140
Assess
RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans Heteromer
P0A805; Q9RY65;
1y695-140
Assess
The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
6NO; 446×MG;MPD;SPD;5jvg5-140
Assess
Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the … Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
LC2;LMA; 73×MG;K;NA;3pip5-140
Assess
The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA pos… Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
35×MG;ZLD;ZN;3dll5-140
Assess
Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a thre… Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
70×MG;ERY;4wfn5-140
Assess
The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with ever… Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
6O1; 123×MG;5jvh5-140
Assess
Crystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radiodurans Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
35×MG;1F4;4ioc5-140
Assess
Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a thre… Heteromer
P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
51×MG;4u675-140
Assess
Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans Heteromer
C6FX52; P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;
ZN;NO1; 35×MG;2zjp5-140
Assess
Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Heteromer
P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;
1nkw7-130
Assess
COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN Heteromer
P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;
ZIT;1nwy7-130
Assess
COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRIS… Heteromer
P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;
DOL;1sm17-130
Assess
COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773 Heteromer
P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;
773;1nwx7-130
Assess
Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit … Heteromer
P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW6; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;
MUL;1xbp7-130
Assess
The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed wit… Heteromer
Q9RX88;
1njp7-130
Assess
The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed wit… Heteromer
Q9RX88;
SPS;1njm7-130
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -3.50 1wki.1.A1-141
75.89
Assess