Q9Y2K7 (KDM2A_HUMAN) Homo sapiens (Human)
Lysine-specific demethylase 2A UniProtKBInterProSTRINGInteractive Modelling
1162 aa; Sequence (Fasta) ; (Isoform 2; Isoform 4; Isoform 5; Isoform 3; ) Identical sequences: Homo sapiens: I3VM53; Pan troglodytes: H2Q481; A0A6D2Y4R3; Pan paniscus: A0A2R9BKN1
It is possible new templates exist for this target since these models were created.
Sequence Features
| 212 | Iron; catalytic | ||
| 214 | Iron; catalytic | ||
| 284 | Iron; catalytic | ||
| 571 | Zinc | ||
| 574 | Zinc | ||
| 577 | Zinc | ||
| 582 | Zinc | ||
| 585 | Zinc | ||
| 588 | Zinc | ||
| 604 | Zinc | ||
| 609 | Zinc | ||
| 620 | Zinc | ||
| 623 | Zinc | ||
| 642 | Zinc | ||
| 645 | Zinc | ||
| 650 | Zinc | ||
| 653 | Zinc | ||
| 672 | Zinc | ||
| 675 | Zinc | ||
| 564-610 | CXXC-type | ||
| 617-678 | PHD-type | ||
| 304-342 | Jumonji, helical domain IPR041070PF17811 | ||
| 565-609 | Zinc finger, CXXC-type IPR002857PF02008 | ||
| 614-676 | Zinc finger, PHD-finger IPR019787PF16866 | ||
| 896-934 | F-box domain IPR001810PF00646 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Ubiquitin Variant (UbV.Fl11.1) bound to a human Skp1-Fbl11 fragment complex. |
Heteromer P0CG47; P63208; | 6byh | ||
| Assess | ||||
| Ubiquitin variant (UbV.Fbl10.1) bound to a human Skp1-Fbl11 fragment complex. |
Heteromer P0CG47; P63208; | 6c16 | ||
| Assess | ||||
| Crystal structure of hJHDM1A without a-ketoglutarate | monomer | 1×FE2; | 2yu2 | |
| Assess | ||||
| Crystal structure of hJHDM1A complexed with a-ketoglutarate | monomer | 1×FE2; 1×AKG; | 2yu1 | |
| Assess | ||||
| Crystal structure of the CXXC and PHD domain of Human Lysine-specific Demethylase 2A (KDM2A)(FBXL11) | monomer | 1×EDO; 4×ZN; | 4bbq | |
| Assess | ||||
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| monomer | -0.88 | 5jh5.1.A | 67.75 | ||
| Assess | |||||
Homology models built on isoform sequence
| Isoform | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|---|
| Isoform 2 | monomer | -0.83 | 5jh5.1.A | 66.67 | ||
| Assess | ||||||
| Isoform 2 | monomer | 4×ZN; | -0.73 | 4bbq.2.A | 100.00 | |
| Assess | ||||||
| Isoform 2 | monomer | -3.98 | 2yu1.1.A | 93.79 | ||
| Assess | ||||||
| Isoform 3 | monomer | 1×FE2; 1×AKG; | -2.25 | 2yu1.1.A | 97.78 | |
| Assess | ||||||
| Isoform 3 | monomer | 4×ZN; | -0.75 | 4bbq.2.A | 100.00 | |
| Assess | ||||||
| Isoform 4 | monomer | -0.82 | 5jh5.1.A | 66.67 | ||
| Assess | ||||||
| Isoform 4 | monomer | 4×ZN; | -0.70 | 4bbq.2.A | 100.00 | |
| Assess | ||||||
| Isoform 5 | monomer | -0.90 | 5jh5.1.A | 66.67 | ||
| Assess | ||||||
| Isoform 5 | monomer | 4×ZN; | -0.82 | 4bbq.2.A | 100.00 | |
| Assess | ||||||