Q9Y6H5 (SNCAP_HUMAN) Homo sapiens (Human)

Synphilin-1 UniProtKBInterProSTRINGInteractive Modelling

919 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; )

Sequence Features

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 44V -> A (in dbSNP:rs56285021) VAR_065358 dbSNP
 235E -> G (in dbSNP:rs6867105) VAR_048312 dbSNP
 621R -> C (found in patients with symptoms of Parkinson disease; unknown pathological significance; reduced number of cytoplasmic inclusions in cells expressing C-621 compared with cells expressing wild-type (wt) protein when subjected to proteasomal inhibition; C-621 transfected cells are more susceptible to staurosporine-induced cell death than cells expressing wt protein; dbSNP:rs28937592) VAR_025667 dbSNP
 706E -> Q VAR_065359
 332-406Ankyrin repeat-containing domain
IPR020683PF12796
 421-487Ankyrin repeat-containing domain
IPR020683PF12796
 512-556Synphilin-1, alpha-Synuclein-binding domain
IPR032027PF16700

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Solution Structure of the Coiled-coil Domain of Synphilin-1monomer 2kes512-557
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -2.10 5leb.1.A318-516
24.62
Assess
monomer -2.14 5jhq.1.A319-521
20.81
Assess
monomer -3.87 4oav.1.A318-574
17.96
Assess
monomer -3.15 4oav.1.B263-519
15.38
Assess
monomer -3.15 5led.1.A257-517
18.70
Assess
monomer -4.10 6kyk.1.A262-504
13.48
Assess
monomer -4.72 5vrq.1.A262-499
11.01
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomer-2.186mol.1.A3-148
24.46
Assess
Isoform 2monomer-3.054qfv.1.A3-149
22.86
Assess
Isoform 2monomer-3.175le6.1.A3-150
19.15
Assess
Isoform 2monomer-2.525lel.1.A3-149
21.43
Assess
Isoform 3monomer-1.985jhq.1.A367-569
20.81
Assess
Isoform 3monomer-2.195leb.1.A365-563
24.62
Assess
Isoform 3homo-2-mer-3.914oav.1.A310-566
15.38
Assess
Isoform 3homo-2-mer-4.354oav.1.A366-622
18.37
Assess
Isoform 3monomer-2.665lec.1.A303-563
18.70
Assess
Isoform 4monomer-2.485et1.1.A291-454
28.48
Assess
Isoform 4monomer-3.935le4.1.A291-455
22.70
Assess
Isoform 4monomer-3.775le7.2.A292-454
22.98
Assess
Isoform 4monomer-3.955le9.1.A269-455
19.34
Assess
Isoform 4monomer-4.656f5e.1.A271-455
19.55
Assess
Isoform 5monomer-0.215et0.1.A22-147
32.50
Assess
Isoform 6monomer-2.945le8.1.A335-554
21.80
Assess
Isoform 6monomer-3.295lel.1.A335-554
22.27
Assess
Isoform 6monomer-3.645lem.1.A335-555
22.17
Assess
Isoform 6monomer-3.834oav.1.B327-571
16.74
Assess
Isoform 6monomer-4.626lgp.1.A365-576
14.49
Assess
Isoform 6monomer-4.245h2c.1.A366-574
10.24
Assess