- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 4 x U2G: URIDYLYL-2'-5'-PHOSPHO-GUANOSINE(Non-covalent)
U2G.6: 15 residues within 4Å:- Chain A: V.43, N.44, T.45, K.66, R.85, V.102, K.104, H.119, F.120, D.121, A.122, S.123
- Chain B: H.12
- Ligands: SO4.5, U2G.8
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:T.45, A:K.66, A:R.85, A:S.123, A:S.123
- Water bridges: A:T.45, A:D.83
- Salt bridges: A:K.104
U2G.7: 8 residues within 4Å:- Chain A: D.14, N.24, N.27, L.28, N.94, C.95
- Chain B: C.32, R.33
8 PLIP interactions:2 interactions with chain B, 6 interactions with chain A- Hydrogen bonds: B:R.33, A:D.14, A:D.14, A:N.24, A:N.24, A:N.27, A:C.95
- Water bridges: B:R.33
U2G.8: 8 residues within 4Å:- Chain A: K.39, K.41, P.42
- Chain B: Q.11
- Ligands: SO4.2, SO4.4, SO4.5, U2G.6
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:K.39, A:K.39, B:Q.11
- Water bridges: A:V.43
U2G.12: 12 residues within 4Å:- Chain A: H.12
- Chain B: V.43, N.44, T.45, N.67, D.83, R.85, F.120, D.121, A.122, S.123
- Ligands: SO4.1
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:T.45, B:N.67, B:N.67, B:D.83, B:R.85, B:S.123
- Water bridges: B:T.45, B:S.123, B:S.123
- Salt bridges: B:R.85
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vitagliano, L. et al., A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease. J.Mol.Biol. (1999)
- Release Date
- 1999-11-05
- Peptides
- PROTEIN (BOVINE SEMINAL RIBONUCLEASE): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 4 x U2G: URIDYLYL-2'-5'-PHOSPHO-GUANOSINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Vitagliano, L. et al., A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease. J.Mol.Biol. (1999)
- Release Date
- 1999-11-05
- Peptides
- PROTEIN (BOVINE SEMINAL RIBONUCLEASE): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B