SMTL ID : 187l.1

SPECIFICITY OF LIGAND BINDING IN A BURIED NON-POLAR CAVITY OF T4 LYSOZYME: LINKAGE OF DYNAMICS AND STRUCTURAL PLASTICITY

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: T.142, P.143, N.144, R.145 Ligand excluded by PLIP CL.2: 1 residues within 4Å: Chain A: A.49 Ligand excluded by PLIP

1 x HED: 2-HYDROXYETHYL DISULFIDE(Non-covalent)

HED.3: 2 residues within 4Å: Chain A: A.93, I.100 No protein-ligand interaction detected (PLIP)

1 x PXY: PARA-XYLENE(Non-covalent)

PXY.4: 7 residues within 4Å: Chain A: L.84, Y.88, A.99, M.102, V.111, L.118, L.121 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.84, A:Y.88, A:A.99, A:V.111, A:L.118, A:L.121

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Morton, A. et al., Specificity of ligand binding in a buried nonpolar cavity of T4 lysozyme: linkage of dynamics and structural plasticity. Biochemistry (1995)

Peptides

T4 LYSOZYME: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

T4 LYSOZYME

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