SMTL ID : 1aus.1

ACTIVATED UNLIGANDED SPINACH RUBISCO

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-8-8-mer

Ligands

8 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.203, E.204 Ligands: FMT.2 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.203, A:E.204, H2O.4, H2O.5, H2O.6 MG.3: 3 residues within 4Å: Chain C: D.203, E.204 Ligands: FMT.4 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:D.203, C:E.204 MG.5: 3 residues within 4Å: Chain E: D.203, E.204 Ligands: FMT.6 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:D.203, E:E.204 MG.7: 3 residues within 4Å: Chain G: D.203, E.204 Ligands: FMT.8 2 PLIP interactions: 2 interactions with chain G Metal complexes: G:D.203, G:E.204 MG.9: 3 residues within 4Å: Chain I: D.203, E.204 Ligands: FMT.10 5 PLIP interactions: 2 interactions with chain I, 3 Ligand-Water interactions Metal complexes: I:D.203, I:E.204, H2O.13, H2O.14, H2O.15 MG.11: 3 residues within 4Å: Chain K: D.203, E.204 Ligands: FMT.12 2 PLIP interactions: 2 interactions with chain K Metal complexes: K:D.203, K:E.204 MG.13: 3 residues within 4Å: Chain M: D.203, E.204 Ligands: FMT.14 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:D.203, M:E.204 MG.15: 3 residues within 4Å: Chain O: D.203, E.204 Ligands: FMT.16 2 PLIP interactions: 2 interactions with chain O Metal complexes: O:D.203, O:E.204

8 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 8 residues within 4Å: Chain A: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.202, A:E.204 Water bridges: A:S.379 FMT.4: 8 residues within 4Å: Chain C: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.3 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.204 FMT.6: 8 residues within 4Å: Chain E: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.5 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:E.204 FMT.8: 8 residues within 4Å: Chain G: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.7 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:E.204 FMT.10: 8 residues within 4Å: Chain I: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.9 6 PLIP interactions: 6 interactions with chain I Hydrogen bonds: I:T.173, I:D.202, I:D.203, I:E.204, I:E.204 Water bridges: I:S.379 FMT.12: 8 residues within 4Å: Chain K: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.11 3 PLIP interactions: 3 interactions with chain K Hydrogen bonds: K:T.173, K:E.204, K:E.204 FMT.14: 8 residues within 4Å: Chain M: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.13 3 PLIP interactions: 3 interactions with chain M Hydrogen bonds: M:T.173, M:E.204, M:E.204 FMT.16: 8 residues within 4Å: Chain O: T.173, K.201, D.202, D.203, E.204, H.294, H.327 Ligands: MG.15 5 PLIP interactions: 5 interactions with chain O Hydrogen bonds: O:T.173, O:D.202, O:D.203, O:E.204, O:E.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, T.C. et al., Structure of a product complex of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry (1997)

Release Date

1995-10-15

Peptides

RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE: ACEGIKMO
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE: BDFHJLNP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

C
M

E
N

G
O

I
L

K
M

M
N

O
O

B
S

D
T

F
U

H
V

J
S

L
T

N
U

P
V

RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE

RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE

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